Gene Mvan_0102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0102 
Symbol 
ID4644985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp115955 
End bp116521 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content66% 
IMG OID639803613 
ProductTetR family transcriptional regulator 
Protein accessionYP_950959 
Protein GI120401130 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.508709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.486637 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGCTG TGGCATCGCG AGAGTCGTTC TTCAAGACGG GCCTCGACGT GCTGGCCGAC 
CTGGGCTACG GAGGCCTGAA ACTCGCCGAG GTGTGTGACC GCCTCGGCGT CACCACCGGG
TCCTTCTATC ACTACTTTCC GAACTGGCCG GCGTACTCCC AGGAGCTGGT TGGGCACTGG
TATGAGGGGA TGACCCTCAA GGTCGTCGAC ACCGTGCAGG CCGAGACCGA TCCGCGGCTG
CGCATCGATC GCCTGATCGA GGCCGGACTC ACGCTGCCGC ACAGCGCCGA GGCCGCAATC
CGGGTGTGGA GTGGCGTCGA CCCTCATGTG GGCTCGGTCC AGGAGGCCGT GGATCGCCAA
CGCTTCGACG TCATGCGCGA ATCCGCGCTG GAGGTACTGC GCAATCCGCG CCAAGCCGAG
CTGTTCGCCG CCTGGGCGGT TTATCTTCTG GTCGGGTACG AGCAGGCCAG TTTGCCTGCG
GACGTCGACG GCTTGCGGTG GATTGTCGGT CAGTTGCTCG AGGCGCTCGA CTCGGGCCGG
TTCACGTCGG TGCCCGGCCG TGAGTGA
 
Protein sequence
MGAVASRESF FKTGLDVLAD LGYGGLKLAE VCDRLGVTTG SFYHYFPNWP AYSQELVGHW 
YEGMTLKVVD TVQAETDPRL RIDRLIEAGL TLPHSAEAAI RVWSGVDPHV GSVQEAVDRQ
RFDVMRESAL EVLRNPRQAE LFAAWAVYLL VGYEQASLPA DVDGLRWIVG QLLEALDSGR
FTSVPGRE