Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_0094 |
Symbol | |
ID | 4644977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 106439 |
End bp | 108409 |
Gene Length | 1971 bp |
Protein Length | 656 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639803605 |
Product | PTS system, fructose subfamily, IIC subunit |
Protein accession | YP_950951 |
Protein GI | 120401122 |
COG category | [G] Carbohydrate transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component [COG1445] Phosphotransferase system fructose-specific component IIB [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component [TIGR00848] PTS system, fructose subfamily, IIA component [TIGR01427] PTS system, fructose subfamily, IIC component |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.178291 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGTT CCACCGCACC CATCATCACA CGCGACCTCG TGCTGCTCGA TGTCGCCATC GACGGCGACA AACAGGCCGT CATCGCGCGG TTGGTCAACG CACTGGCCGC CGCGGGCCGC ACCGACGACG CCGACGGACT CATCGGTGCC GCGATGGCGC GGGAGGAACA GTCGGCCACC GGCCTGCCCG GAGGCATCGC GATCCCGCAC TGCCGGTCCC CGTACGTGGA CACCCCGACG ATCGGGTTCG CCCGACTGAC CCCGGGTGTC GATTTCGGCG CGCCGGACGG CCCCGCCGAT CTGGCGTTCC TCATCGCGGC CCCGGACTCC GGCGGCCAGG AGCACATGAA GCTGCTGTCC AGCCTGGCAC GGGCGTTGGT GCGCAAGGAC TTCGTGGAGT CGCTGCGCAA CGCCGGTTCG GCCGACGAAG TGGTCGCGCT CGTCGAAGGC GTGGTCAACC CCGCGCCGGC GGCACCGCCG GCCCCCGTCG AGAAGCCGGC CGCCAAGACC ATCGTGGCGA TCACCGCGTG CCCGACCGGC ATCGCCCACA CCTACATGGC CGCCGACGCG CTGGCCGCCG CCGCCAAGGA GGCCGGTGTC ACGCTCGTCG TCGAGACCCA GGGATCCTCG GGCAGCACCC CGCTGCCGTC GGACACCATC GCCGGGGCCG ACGCGGTCAT CTTCGCCACA GACGTCGGCG TCAAGGACAG AGGCCGCTTC GCCGGCAAGC CCGTCGTCGC CTCCGGAGTC AAGCGGGCGA TCAACGAGCC CGCCAAGATG ATCGCCGAAG CCGTTGCCGC CGCCGATAAT CCGAATGCGC CGCGGGTCGA GGGATCCGGC GCAGCGGCAT CCGAGGCGCC ATCGGGGGAC GTCGGCTGGG GCACCCGCAC CCGGCAGATC CTGCTGACCG GCGTGAGCTA CATGATCCCG TTCGTCGCGG CGGGCGGTCT GCTGATCGCG CTGGGCTTCC TGTTCGCCGG CTACGAGATC GCCGACACCG GCAACGACAT CGCGCTGAAC AACTCACTGA CCAACCTTCC GCCGGGCGGT TTCCTCGAGT ACCTGGGCGC GATCCTGTTC AGCCTGGGCG GGCTGGCGTT CGGCTTCCTG GTACCCGCAC TGGCCGGCTA CATCTCGTTC GCGATCGCCG ACCGGCCGGG CATCGCACCG GGCTTCACCG CCGGCGCGCT GGCGGTGTTC ATCGGCGGGG GCTTCATCGG CGGCATCGTC GGCGGTGTGC TGGCCGGCTT CGCAGCACTG TGGATCAGCA ACCTCAAGGT GCCGCAATGG TTCCGGGGCC TGATGCCGGT GGTGATCGTC CCGCTCGGTG CGTCGCTGTT CGTCGGCCTG ATCATGTTCT TCCTGGTGGG TCGGCCGCTG GCGCTGATCA ACAGCGGCCT GACCAACTGG CTGTCCGGAC TGTCGGGCAC CTCGGCGATC TTCCTCGGCA TCATCCTCGG CCTGATGATG TGCTTCGACC TGGGCGGTCC GGTCAACAAG GCCGCCTACG CGTTCGCCAC CGCCGGGCTG GCAGCCGAGA CCACCGCGTC GTTCGAGATC ATGGCCGCGG TGATGGCCGC CGGTATGGTG CCGCCGCTGG CGATGGCGCT GGCCACCACC ATCCGTCCCG GCCTGTTCAG TGAGCCCGAG CGCGAGAATG GCCGCGCTGC TTGGCTTCTC GGCGCTTCGT TCATCTCCGA GGGCGCCATC CCGTTCGCCG CGGCCGACCC GCTGCGGGTG ATCCCGTCGA TGATGTTCGG CGGCGCCATC ACCGGCGCCC TGTGCATGGC CTTCGGCGCG ACGTCACGCG CCCCGCACGG CGGCATCTTC GTGCTGTTCG CCATCGACAA CAAGCTCGGC TTCGTCATCG CCCTGGTGGC GGGCACCGTC GCGGCCGCGC TGGCCGTCGT CGCAGCCAAG CAGTTCATCA AGGCCGGCGC CAAGACCGAA CCCGAGCTCG TCACCGCCTG A
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Protein sequence | MTSSTAPIIT RDLVLLDVAI DGDKQAVIAR LVNALAAAGR TDDADGLIGA AMAREEQSAT GLPGGIAIPH CRSPYVDTPT IGFARLTPGV DFGAPDGPAD LAFLIAAPDS GGQEHMKLLS SLARALVRKD FVESLRNAGS ADEVVALVEG VVNPAPAAPP APVEKPAAKT IVAITACPTG IAHTYMAADA LAAAAKEAGV TLVVETQGSS GSTPLPSDTI AGADAVIFAT DVGVKDRGRF AGKPVVASGV KRAINEPAKM IAEAVAAADN PNAPRVEGSG AAASEAPSGD VGWGTRTRQI LLTGVSYMIP FVAAGGLLIA LGFLFAGYEI ADTGNDIALN NSLTNLPPGG FLEYLGAILF SLGGLAFGFL VPALAGYISF AIADRPGIAP GFTAGALAVF IGGGFIGGIV GGVLAGFAAL WISNLKVPQW FRGLMPVVIV PLGASLFVGL IMFFLVGRPL ALINSGLTNW LSGLSGTSAI FLGIILGLMM CFDLGGPVNK AAYAFATAGL AAETTASFEI MAAVMAAGMV PPLAMALATT IRPGLFSEPE RENGRAAWLL GASFISEGAI PFAAADPLRV IPSMMFGGAI TGALCMAFGA TSRAPHGGIF VLFAIDNKLG FVIALVAGTV AAALAVVAAK QFIKAGAKTE PELVTA
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