Gene Mvan_0085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0085 
Symbol 
ID4644968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp95565 
End bp97766 
Gene Length2202 bp 
Protein Length733 aa 
Translation table11 
GC content67% 
IMG OID639803596 
Producthypothetical protein 
Protein accessionYP_950942 
Protein GI120401113 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.914086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0722389 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTATCT CCAAGAATGT TGGTGAATAT GTCGAAGAGA TGACTGAACC CGCTGGTTGG 
CCTCATGTTG ACGAAGACCA CCTGTACACG CGTGCTTCAG GATTTGTCGA CAAAGTGACA
CAGTTGATCG CTGTTCGAGA CAGCTGGCAA CAACAGCAGG CGCGTTTGTT CGGCGGGGGA
GCCTGGTCAG GCGCTGCAGC CAACGCCGCA GAGACAGCAA TACAAGCTCG CGTGAGCGAA
ATGATCTCGC TCATAAATCA TCTGGAGAAG GCAATCGCCT GGTATACGAT GACCGCGCGA
ACGATTGCGC AGACCAAAGC GACGATAAAT CAGAATCTCG AAACGTCATA CTCTTTCATT
GCATCCATTC GCGCCTCCCC GGAACTCGAC GAGGTGGAAA AAGACGGGAT CATCCAATCG
TGGGTGCAAT CACAACGTGC GGTCAACACC GTGACGGTTC TGACAGCGGC CGGAGACGTT
GCCGCGTTTG ATTCGTGGCA GCCGCCACCA AGCCCACAAC GAATCCCGGC CACGCTGAGT
CCGCCCGAGT CCGTCTCCGC GCCCAGCGGC CCAGAGCCTC CGAAACAGAA CGTTGGCTAC
TTTGGTCCGA CCCGCCCGCC TGCTGCCGAA CCGCGAGGTG GGTCGGCCGG CCTGTCGGCG
AAAGCGGCGA ATGATGCTTA CATGGCTCAA GGGCCGAGCG CTTCCGCTGA TCAGCCCGTT
CCTATTTCGC AGAGTTCCGG CGGCGGCTCG CCCGGCAGCC CTGGTGGACT TGGAAGCCCA
GGCTCACCCT CAAGCTCCAC ATCAGGATCC AGCCCGATCA GCACGTCAGG AGGCTCTTCG
TCCGGCAGCG GCGCAAGTTC GTCCGGTTCC GGGTCTGGTT CCGGCGGATC GTCATCGGCG
GCGGCGTCAT CGTCCGGGAC CTCGCCGACG TCGGGCGGCC AATCGGCCAC GGGCGCGGCG
GGCGGGCAGC CAACCGCTGC ATCGCCAGCC AGCGCCGCCA AGGCGCAGCC TTCTCCCATG
CAGCAGATGG TGAATCAGGC GCCGCCCCCG TTGGCGTCGT CGGCTCCCGC CACGTCACCC
GCACCGGCTC CGGCACCCAG CCAACCAGCG GCCGCGCCGT CGGCGGCCGC CGGCGCCGGA
CCGAGCAGCG GCGGCGTTGG TGGTATCTCC GCCTCCGCCG GTTCCGCACC CGTCGGCGCA
GCGCCGCCCA GCGGCGCCCC GCCGGCTCCG CCGGTTCCGC TCGGGCCCCC GACATCACCG
GCGCCTCCTG GACCAGTACC GCCGACGGGC ACACCAGGTA CCGCCCCAGG GGGCGCAATG
GGTCCTGGTG TCGCGCCGAT GTCAACTACC GGCACCGCCG GCGGTGCGGC ACCGGCGCCC
ATCCCGGTGT CCACCGCCCG CGCCGAGCGT GACGCGATCG CGGCCGCGTC CACTGCGGGC
GCCCTGCGCC GCAAGACCAA CGGCGCGGAC CCCCTGCAGC AAGCGCGCCA TATCGCCGCC
GCCCTCAACG TCGGCATCAT GGACTTCGGC TTCTTCTGGG TCACCGGCGT CACGATGGAG
GGCACGATCG TCGTCGCCAA CAGCTACGGC CTCGCCTACA TCCCCGCCGG GGTCGCCCTT
CCCGACCAGG TCCGGATGGC CACGGCCGAC GAGTCGATCC CGGCCGGCGA GCGCGCCAAG
TGGGCGACCT ACCCGATCCT CGCCGTGCAA GGTTGGGCAC AGCACCACAA CCAGCAGCTT
CGTGCCGTCG TCGCCACCGA AGAGCAGTTC GCGAACTTCG ACCCCGGCGT TGCGAAGATC
ATTCTCACCC AGGACGACAT CCCTGAAAGC GGCCAGATGC AGGGACGCAG CCGTCTGGAA
GTCATCGCAC CGGAGGCGGC CCAACGCCTC AGCGCTGTCA GCGATTTCGG CTTGAACGAT
CTGCTGCCCC CCGCCACAGC AGACCTCGAA CCGCCTGCGG ACGACAGCGC CCGGCTGTGG
TTCGAAGTGG CCAAGCCGCT GATGAGCACC AATCCTCAGC GCAGCGGTCC GCATCTGCAG
GCATTCGTCG CCTATGCCAA GCACGCCCAG GAGTTGGCGC TCCATAAAGC GCACAACGCC
GCGGAACCTG GCGACCAACG ACTGGCCATC GCCGACTGGG TGTACTGGCA GCACCTCGAG
GTCCTGCTCA CCGACGCCGT CAGCACGGAT GCTGCCGTGT AG
 
Protein sequence
MGISKNVGEY VEEMTEPAGW PHVDEDHLYT RASGFVDKVT QLIAVRDSWQ QQQARLFGGG 
AWSGAAANAA ETAIQARVSE MISLINHLEK AIAWYTMTAR TIAQTKATIN QNLETSYSFI
ASIRASPELD EVEKDGIIQS WVQSQRAVNT VTVLTAAGDV AAFDSWQPPP SPQRIPATLS
PPESVSAPSG PEPPKQNVGY FGPTRPPAAE PRGGSAGLSA KAANDAYMAQ GPSASADQPV
PISQSSGGGS PGSPGGLGSP GSPSSSTSGS SPISTSGGSS SGSGASSSGS GSGSGGSSSA
AASSSGTSPT SGGQSATGAA GGQPTAASPA SAAKAQPSPM QQMVNQAPPP LASSAPATSP
APAPAPSQPA AAPSAAAGAG PSSGGVGGIS ASAGSAPVGA APPSGAPPAP PVPLGPPTSP
APPGPVPPTG TPGTAPGGAM GPGVAPMSTT GTAGGAAPAP IPVSTARAER DAIAAASTAG
ALRRKTNGAD PLQQARHIAA ALNVGIMDFG FFWVTGVTME GTIVVANSYG LAYIPAGVAL
PDQVRMATAD ESIPAGERAK WATYPILAVQ GWAQHHNQQL RAVVATEEQF ANFDPGVAKI
ILTQDDIPES GQMQGRSRLE VIAPEAAQRL SAVSDFGLND LLPPATADLE PPADDSARLW
FEVAKPLMST NPQRSGPHLQ AFVAYAKHAQ ELALHKAHNA AEPGDQRLAI ADWVYWQHLE
VLLTDAVSTD AAV