Gene Mvan_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0048 
Symbol 
ID4644902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp60981 
End bp61526 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content68% 
IMG OID639803559 
Producthypothetical protein 
Protein accessionYP_950905 
Protein GI120401076 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.282751 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGG GTATTAGTCG TCATGTCGCG GCTCTGCTCA TCGCGATGTC AGCTGTAGGA 
GGATGCTCAC CGATGTCCCC ATCCGACCAG AGCACACCGA AGGCGGACGG GCCCACCGCC
CCACCGCCGT CAGACGCCGA ATCCCGCGCA CAGGTGGTCG ACACCGCCAA AGACGTTGTG
CGGGCGGCAG ATCTGCGCGT GACTTACGCG AGCTTCCAGT GGGAGTGGTG CAACGACCAG
GGCGATCCTC CGTTCCACGG CCGGGTCGAC ATGGCGTTCG AGGTGCCGCC CGGCGCCGAC
AGCCAGGGCC TGGGCCGGCA GATCGCGGCC ACCCTCGCCG AGCTGCCGGG CTGGGCGCCA
GGGCCACCAC CGGGATTCCA GCCCGCGGGC GACGTCGTCC ACAGGGGCGG TGTCATGGTG
ATCGTCGGTC CGGGAAACTA CCCCGAGCGT GGCGCGGTCG AGATCTACGG TGAATGCCGC
AACATGAACG ACCACCGCGA CGACAACGAG CTCACCGACA TCACCGCCGA GGTCCGGGCC
GGCTGA
 
Protein sequence
MTTGISRHVA ALLIAMSAVG GCSPMSPSDQ STPKADGPTA PPPSDAESRA QVVDTAKDVV 
RAADLRVTYA SFQWEWCNDQ GDPPFHGRVD MAFEVPPGAD SQGLGRQIAA TLAELPGWAP
GPPPGFQPAG DVVHRGGVMV IVGPGNYPER GAVEIYGECR NMNDHRDDNE LTDITAEVRA
G