Gene Mvan_0047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0047 
Symbol 
ID4644901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp60111 
End bp60977 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content69% 
IMG OID639803558 
Productpolysaccharide deacetylase 
Protein accessionYP_950904 
Protein GI120401075 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.322661 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATGGACC GCTTCCGCTG GCCCGACGGG AAGACCGCCG CCGCCGCGTT CACCTTCGAT 
GTCGACGCCG AGTCCGCGAT CCTGTGGGGC AACGAGAGTG TCGGCGCCCG GATGAGCGTG
ATGAGTCATC AGGCCTACGG GCCGCTGGTC GGCATCCCGA GGATCCTGGA TCTGCTTGAG
CAGCACCAGG TTCCGTCGAC GTTCTTCGTC CCGGGGCACA CCGCCGACAG GTACCCGGAA
GCCGTCCGCA GCATCGTCGC CGCCGGGCAC GAGATCGCCC ACCACGGCTA CCTGCACGAG
CAGCCCACCG CGCTCACCCT CGAGCAGGAG ATCGACGCCC TGGACCGCGG GCTGGCCGCC
CTGGCCGACG TGGCGGGGGT TCGCCCGGTG GGATACCGCG CCCCGATGTG GGACCTGTCC
TGGCGCACCC CGGCGCTGCT GGCCGAGCGT GACTTCCTGT ACGACTCGAG CCTGATGGAC
GCCGACCATC CCTACGAACT GGCGATCACC CCCGGCGCGC AGGAGTCGCT GGTCGAGATC
CCCATCCAAT GGGCACTCGA CGACTGGGAG CAGTACTGCT TCCTGCCGGA CATCTCCGGA
AGCGGACTGA TCGAGACTCC GCGCAAGGCG CGGGAGCTGT GGCAGTCGGA ATTCGACGCG
CTGCGGAAGG TGGGCGGCTG CTGGGTGCTG ACCAACCATC CGTTCCTCAC CGGCCGGCCG
TCCCGGGCCG CCGAGCTGGG TGAGCTGATG CGTTACGTGC TCGACCACGA CGACGTGTGG
GTGTCCAGCC TCGGTGCAGT GGCCGAACAT GTTCGTTCGC TGAACCTTTC ACCGCGTTCC
ATCACCCCAC CCGACGTCCC GCGCTGA
 
Protein sequence
MMDRFRWPDG KTAAAAFTFD VDAESAILWG NESVGARMSV MSHQAYGPLV GIPRILDLLE 
QHQVPSTFFV PGHTADRYPE AVRSIVAAGH EIAHHGYLHE QPTALTLEQE IDALDRGLAA
LADVAGVRPV GYRAPMWDLS WRTPALLAER DFLYDSSLMD ADHPYELAIT PGAQESLVEI
PIQWALDDWE QYCFLPDISG SGLIETPRKA RELWQSEFDA LRKVGGCWVL TNHPFLTGRP
SRAAELGELM RYVLDHDDVW VSSLGAVAEH VRSLNLSPRS ITPPDVPR