Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_0047 |
Symbol | |
ID | 4644901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 60111 |
End bp | 60977 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639803558 |
Product | polysaccharide deacetylase |
Protein accession | YP_950904 |
Protein GI | 120401075 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.322661 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATGGACC GCTTCCGCTG GCCCGACGGG AAGACCGCCG CCGCCGCGTT CACCTTCGAT GTCGACGCCG AGTCCGCGAT CCTGTGGGGC AACGAGAGTG TCGGCGCCCG GATGAGCGTG ATGAGTCATC AGGCCTACGG GCCGCTGGTC GGCATCCCGA GGATCCTGGA TCTGCTTGAG CAGCACCAGG TTCCGTCGAC GTTCTTCGTC CCGGGGCACA CCGCCGACAG GTACCCGGAA GCCGTCCGCA GCATCGTCGC CGCCGGGCAC GAGATCGCCC ACCACGGCTA CCTGCACGAG CAGCCCACCG CGCTCACCCT CGAGCAGGAG ATCGACGCCC TGGACCGCGG GCTGGCCGCC CTGGCCGACG TGGCGGGGGT TCGCCCGGTG GGATACCGCG CCCCGATGTG GGACCTGTCC TGGCGCACCC CGGCGCTGCT GGCCGAGCGT GACTTCCTGT ACGACTCGAG CCTGATGGAC GCCGACCATC CCTACGAACT GGCGATCACC CCCGGCGCGC AGGAGTCGCT GGTCGAGATC CCCATCCAAT GGGCACTCGA CGACTGGGAG CAGTACTGCT TCCTGCCGGA CATCTCCGGA AGCGGACTGA TCGAGACTCC GCGCAAGGCG CGGGAGCTGT GGCAGTCGGA ATTCGACGCG CTGCGGAAGG TGGGCGGCTG CTGGGTGCTG ACCAACCATC CGTTCCTCAC CGGCCGGCCG TCCCGGGCCG CCGAGCTGGG TGAGCTGATG CGTTACGTGC TCGACCACGA CGACGTGTGG GTGTCCAGCC TCGGTGCAGT GGCCGAACAT GTTCGTTCGC TGAACCTTTC ACCGCGTTCC ATCACCCCAC CCGACGTCCC GCGCTGA
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Protein sequence | MMDRFRWPDG KTAAAAFTFD VDAESAILWG NESVGARMSV MSHQAYGPLV GIPRILDLLE QHQVPSTFFV PGHTADRYPE AVRSIVAAGH EIAHHGYLHE QPTALTLEQE IDALDRGLAA LADVAGVRPV GYRAPMWDLS WRTPALLAER DFLYDSSLMD ADHPYELAIT PGAQESLVEI PIQWALDDWE QYCFLPDISG SGLIETPRKA RELWQSEFDA LRKVGGCWVL TNHPFLTGRP SRAAELGELM RYVLDHDDVW VSSLGAVAEH VRSLNLSPRS ITPPDVPR
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