Gene Mvan_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0043 
Symbol 
ID4644897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp56236 
End bp57687 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content67% 
IMG OID639803554 
Productamino acid permease-associated region 
Protein accessionYP_950900 
Protein GI120401071 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.979083 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.243492 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATAT CGGTCAGCCC GGCGGAGCAG CCGCCACAGT TGCGCCGCGA GTTCTCCCTG 
GGGTCGGCGT TCGCGTTCGC CTTCGCGTTC ATCTCGCCGA TCGTCGCCCT TTACGGCATC
TTCGGCCTGG CCCTGTCGGC GGCCGGGCCG AGCTTCTGGT GGGGCTTCGC GCTGGTCTTC
GCCGGCCAGT TCCTGGTGGC ATTGGTGTTC GCCGCCCTGG TGTCGCGCTG GCCGCTGGAG
GGATCGATCT ATCAGTGGTC GCGGCGCCTG CTCGGCAGCA CCTACGGCTG GTTCGCCGGG
TGGGTCTACA TGTGGACGCT GGTGATCGCG ATGGCGACCG TCGCGCTGGG CGCGGCCGGG
TTCGTCGCCC ACATCGTCGG CATCGAGGAA GCGTCGGGCG GCACCCTGGC CTGGATCGCG
CTGCTGATCC TACTGGCCGG TACCGCCGTC AACCTGGTGG GCCGTCAGGC GCTGAAGATC
TTCATGATCG GCAGCATCAT CGCCGAGGTC GTCGGCTCGG TGGTGCTGGG CACGTGGCTG
CTGCTGTTCC ACCGGCAGAA CTCGCTGTCA GTGCTGTTCG AAGGTGGCGG CACCGACGTC
GACCTCTGGT CCTACCTCGG CGGTCCGTTC CTGTTGGCGG TCGCATTCAT CGGTTGGTCC
TTCGTCGGTT TCGAAAGCGC CGGCTCGATC GCCGAGGAAG TGCACAACCC GGGCCGGGAC
CTGCCCAAGG CCGTGCTGTT CTCACTGGCC TTCATCGCGC TGGTGGTGGG CTACTCCAGC
CTGGCGATCA TCCTGGCCAT CCCCGACCTC GACGCGGTCG CCGAAGGAGC GGTCAGCGAT
CCGGTCTACG AGACGCTGAC CACCGCGCTG GGCGCCGGTA TCGCCAAGCC CGTCCAGGTC
CTGTTCGTCA TCGGGTTCCT GGCCAGCTTC CTGGCGCTGC AGACATCGGC GTCGCGGGTG
ATCTGGGCCT ACGCCCGTGA TGGCGCACTG CCCGCCGCCG GCACGCTGGT GCAGCTGCGC
GGCCGGGCCC GCATCCCGGT GGTGGCGATC CTGGTGACCA CGGTGATCGG GGCGGGCCTG
TTCCTGCTCA GCATCGTCGC CGGAGACATC TACTCGTTGA TGGTCAACTT CACCGCGGGC
GGGTTCTATC TGGCCTTCCT GTTCCCGCTG ATCGGCTTCC TCGTGGTGGT CCTGCGCAAG
GTCTGGAAGC CCGCGTCGTT CTCACTGCGC GGATGGACGC TGCCGGTCGC GGTGGTGGCC
GTGGTGTGGG CCGTGCTCCA GTTCCTCAAC ATCGCCTGGC CCCGAGTCGC TTTCGAGCAG
CGCTACCTGG ACTGGTCGGT CTGGATCGGC GTCGTGGTGC TGGGGATGAT CGGAGCGGTG
TTGTTCGCAA CCGTGAAGTC CCGGATCGCC GCACCGCAGG ATCAGGACGA CCGGGCACTG
GTGGATGACT GA
 
Protein sequence
MSISVSPAEQ PPQLRREFSL GSAFAFAFAF ISPIVALYGI FGLALSAAGP SFWWGFALVF 
AGQFLVALVF AALVSRWPLE GSIYQWSRRL LGSTYGWFAG WVYMWTLVIA MATVALGAAG
FVAHIVGIEE ASGGTLAWIA LLILLAGTAV NLVGRQALKI FMIGSIIAEV VGSVVLGTWL
LLFHRQNSLS VLFEGGGTDV DLWSYLGGPF LLAVAFIGWS FVGFESAGSI AEEVHNPGRD
LPKAVLFSLA FIALVVGYSS LAIILAIPDL DAVAEGAVSD PVYETLTTAL GAGIAKPVQV
LFVIGFLASF LALQTSASRV IWAYARDGAL PAAGTLVQLR GRARIPVVAI LVTTVIGAGL
FLLSIVAGDI YSLMVNFTAG GFYLAFLFPL IGFLVVVLRK VWKPASFSLR GWTLPVAVVA
VVWAVLQFLN IAWPRVAFEQ RYLDWSVWIG VVVLGMIGAV LFATVKSRIA APQDQDDRAL
VDD