Gene Mvan_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0005 
Symbol 
ID4647690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5601 
End bp6158 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content73% 
IMG OID639803513 
Producthypothetical protein 
Protein accessionYP_950862 
Protein GI120401033 
COG category[R] General function prediction only 
COG ID[COG5512] Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.731239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.310544 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAG AGGACGACGC CCTGAATCCG CCCGCCCATC TCGAGGGCCT CAAAGGTATG 
GACCTGGTCC GCCGCACCCT CGAGGAGGCG CGCGGTGCGG CGCGCCAGCA GGGCAAGAAC
GTCGGGTTGG GCCGCTACTC CCCCACTGCG CGCCGGGTCG CGGGCAGTGG CAGGCGCCGA
TGGTCGGGCC CGGGACCGGA CAGTCGCGAC CCCCAGTTGC TCGGAGCGGT CACCGGCGAC
GTGGCGAGGA CGCGGGGCTG GTCGGCCAAG GTCGCCGAGG GGGCGGTGTT CGGCAGGTGG
CGCGCCGTGG TCGGGGACCA GATCGCCGCG CACGCCGCGC CGACCGCACT GCATGAGGGC
GTCCTGACGG TGTCGGCGGA ATCGACCGCA TGGGCCACAC AGCTGCGGAT GGTGCAGTCC
CAGATCCTGG CCAAAATCGC CGCGGCCGTC GGCGACGGCG TGGTCACGTC GCTCAAGATC
GTCGGGCCGG TGGGACCGTC CTGGCGGAAG GGGCCCTACA CCGTGCCCGG TCGCGGTCCG
CGGGACACCT ACGGTTGA
 
Protein sequence
MTEEDDALNP PAHLEGLKGM DLVRRTLEEA RGAARQQGKN VGLGRYSPTA RRVAGSGRRR 
WSGPGPDSRD PQLLGAVTGD VARTRGWSAK VAEGAVFGRW RAVVGDQIAA HAAPTALHEG
VLTVSAESTA WATQLRMVQS QILAKIAAAV GDGVVTSLKI VGPVGPSWRK GPYTVPGRGP
RDTYG