| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3722 |
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| Symbol | |
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| ID | 4624871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 4537377 |
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| End bp | 4539560 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639798829 |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_944995 |
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| Protein GI | 119947315 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAATA ATATTCCGCA ACCCAAAATT CTGATTGTCG ATGACCGAAT AGAAAATATT
CGTTCGATGA AACGGGTGCT TGAGTTAATA GATGCTGAGC TTTACACTGC GCAGTCCGGT
ATTGAAGCGC TGGGATTTTT ATTACGTCAT GACTTTTCGA TGATTCTGCT CGACGTAATG
ATGCCGGAAA TGGATGGTTT TGAAACCGCG GAACTGATTC GTGGCAACCT CAACAGCCAG
CATACACCGA TCATCTTTGT TACAGCGGCT GACAAAGATG AGAGCTTTGA ATTCAAAGGT
TATGATGTCG GTGCTGTCGA TTACCTTTAT AAACCGATTC AGCCCCATAT ATTGCAGAGA
AAAGTACGTT TTTTTCTGCA GTTGAGTAAT AATAAGAGCC TGCTGGAGAA CAGTCTATGC
GAGCTAAAGC GGGTAAAAGA TCACAATGAA CTGCTCCTAA AATCAACTGC CGAAGGTATT
ATCAGTCTGG ATCCGATGGG AAAGATAAAC TTTGCCAATC CAGCTGCCAA ACAGCTACTG
ATGTATAACG ATGATACTAT ACTGGGTATT GATTATGCTC ATATTCAGGG CACTGATAAT
CTAACATCCC CTTTTAAAGA CTGTGCGCTT CATCATACCG CATTATCTAA ACGTATTATC
CATGATGATC AGCAGTCCTT TCATTGCTTT GATGGCAGCA GCTTCCCGGT TGAGTTTACC
GCCAGTCCGA TTTGTAAAAC CAACTCCGAA AGCTCCGGTA TAGTATTGGT ATTTCAGGAT
ATCAGTGAGC GCAAAAAAAC AGAACAACAA TTAACCCGTC TTGCACAATA TGACTGCCTC
ACCGGGCTAC CCAATCGAGC ACTGTTTACC AGTCTTCTGA GTCAGGCAAT TTCCCGCTCT
GACCGCCGTA AAAACAAACT GGCATTACTT TTTCTGGATT TGGATCGTTT TAAACAAGTT
AATGATTCCT TAGGACATGA TGTGGGTGAT CTGCTTTTAC AGCAGGTGGC CCAGCGACTT
CAGTTGGCGA CCCTAGAAGG TGGCACGGTC AGTCGGCTAG GTGGTGATGA ATTTATGGTG
ATTTTAGAGG AGGTCAACTC CGAATCTCAT AAAGCTGCCA AGCTGGCCCA AAAAATGATA
ACCAGCCTGG ATGCCCCTTT TAATATCCTG GGTCGTGAGG TATTAATTAG TACCAGCATA
GGTATTGCAC TCTGCTCAGG CTCGACGCAG TGTATAGACT CTTTGTTGAA ACGTGCTGAT
ATGGCAATGT ACCGGGCGAA AGAACAAGGG CGAAATAATT TTCAGTTTTA TACCGCCGAA
CTGCAGCAAC AGGCGTCAAA GTCAATAGAG TTAGAAAACC GCTTACGTCA TGCGCTGCAG
CGAAAAGAGT TCTTTTTACA TTATCAGCCA CAGGTTGATA CAAATAGCGG CCAGATTATC
GGTCTTGAGG CGCTATTACG TTGGCAACCC GATGGCCAGG CACTTATTTC GCCAGAAGAA
TTTATACCGG TTGCCGAAGA AGCCGGGCTT ATAGTCCCTA TTGGCGAGTG GGTACTGCGT
GAAGCCTGTT CGCAGCTTCA CCGCTGGCAT AGATCTGGTT TGTTATCACC AACCGTAAAA
ATGGCGGTAA ATCTGTCGGT ACGACAGCTG GAGCATACAT CGCTGCTAAG TACATTAACT
CAAATTCTAC AAGAAACCGG TCTTAAACCA TCTCAGTTGG AGTTGGAAAT TACTGAGACT
GCGGTGATGA AAGATCCTGA TCTGGTAGTG AATATACTTC ATAGTATTCA CGCGATGGGA
ATTCAACTGT CTTTGGATGA TTTCGGCACG GGTTATTCAT CCTTGCGTTA TCTGAAATTA
TTGCCTTTGC ATGTATTAAA AATTGATCGT TCATTTATCA ATGATATTGG TGGTAAACAA
AGGGATCAAG CAATACTGGA ATCTATTATC TATTTATCCA GAAATCTGGA CTTAACGGTA
GTAGCTGAAG GGGTTGAGAC ACAAGAACAA CTAGATTTTC TAAGTCGCTT TAACTGCCAT
TCTATTCAGG GTTATTACAT CAGTAAACCA AAATCAGCAG CTAACATTGA AAAACTACTC
CACAAAAATA AAGACGGCAA TTTACTACCT ATGAAAACCT CTGTAATACC AGATAGACTG
ATTTTGCTAC CTGAGGTCTA TTGA
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| Protein sequence | MPNNIPQPKI LIVDDRIENI RSMKRVLELI DAELYTAQSG IEALGFLLRH DFSMILLDVM
MPEMDGFETA ELIRGNLNSQ HTPIIFVTAA DKDESFEFKG YDVGAVDYLY KPIQPHILQR
KVRFFLQLSN NKSLLENSLC ELKRVKDHNE LLLKSTAEGI ISLDPMGKIN FANPAAKQLL
MYNDDTILGI DYAHIQGTDN LTSPFKDCAL HHTALSKRII HDDQQSFHCF DGSSFPVEFT
ASPICKTNSE SSGIVLVFQD ISERKKTEQQ LTRLAQYDCL TGLPNRALFT SLLSQAISRS
DRRKNKLALL FLDLDRFKQV NDSLGHDVGD LLLQQVAQRL QLATLEGGTV SRLGGDEFMV
ILEEVNSESH KAAKLAQKMI TSLDAPFNIL GREVLISTSI GIALCSGSTQ CIDSLLKRAD
MAMYRAKEQG RNNFQFYTAE LQQQASKSIE LENRLRHALQ RKEFFLHYQP QVDTNSGQII
GLEALLRWQP DGQALISPEE FIPVAEEAGL IVPIGEWVLR EACSQLHRWH RSGLLSPTVK
MAVNLSVRQL EHTSLLSTLT QILQETGLKP SQLELEITET AVMKDPDLVV NILHSIHAMG
IQLSLDDFGT GYSSLRYLKL LPLHVLKIDR SFINDIGGKQ RDQAILESII YLSRNLDLTV
VAEGVETQEQ LDFLSRFNCH SIQGYYISKP KSAANIEKLL HKNKDGNLLP MKTSVIPDRL
ILLPEVY
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