Gene Ping_3716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3716 
Symbol 
ID4623379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4526929 
End bp4528008 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content35% 
IMG OID639798824 
ProductDNA replication and repair protein RecF 
Protein accessionYP_944990 
Protein GI119947310 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.362635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTCA GTAGATTGAT TATCCATCAG TTTCGCAATA TAAACTCGGC CACACTCGAT 
TTTAATCCTA AAATAAATGT AGTCGTAGGG CCTAATGGCA GTGGTAAAAC AGCACTGCTT
GAAGCGATTT ACTTTCTTGG ACTCGGTCGC TCTTTTCGTA CTCACTTAAC CAGTCGCGTG
GTTGAACACG AATCTAAATC CTTTACGCTT TTTAGCGAAA TTCAAAATAA TAACGGATCA
ATTCCGATTG GTTTACAAAA AAGTAAAAGT GGTGAAACGT TATTAAAAAT TAATGGCAGT
TACTGCAAAA AATTAGCTAA TTTAACCCAA TACTTGCCAT TACAACTTAT TACCCCGGAA
GGTTACACTT TACTCTCAGG AAGCCCTAAA AACCGGCGTG CTTTTTTAGA TTGGGGGGTT
TTCTACCATG ATCCTATTTT TTACCCTAAC TGGTCGCGTA TTAAACGACT TTTAAAGCAA
CGTAATGCCG CTTTAAAGCA ATGTAAAACT TACAACGAGC TCCAAATATG GGATAATGAA
CTTTGTATTT TAAGTGAAGA AATCAGTCAA CAACGAGAAG CTTATTTTGA GTTGCTAATG
CCATTAGTAA AACAAACATT AGCCGATTTT TTACCTGATT TTTCTATTAC TAGTCAGTTC
TTTTGCGGCT GGGATAAAAA CAATAAATCA TTACAAGATT ATCTGTTTGA TAATTTTTAT
CGCGACAAAC AAATTGGTTA TACCAGTGCT GGGCCTCAAA AAGCAGATCT GCGCTTTAAA
ATCAATGGAA TACCTGTTAG CGATGTATTA TCAAGAGGGC AGTTAAAGTT ATTTGTTTAC
GCCTTACGCT TAGCGCAGGG ATTATTTTTA AACTCTTTTG ATAATAAACA GTGTGTTTTT
TTAATTGACG ATTTTAGTTC TGAATTAGAT CAGAACAAAC AACAGATATT AGCAAAGCAT
ATTATAAATT CGAATGCCCA AATATTTATC AGTGTTATTG CAGCAGAAAA TATTGATCGA
TTATTTGGAC AGGAACAGAC TGTGTTTCAC GTGGAGCACG GTAAGATTAC AGTAGAATAG
 
Protein sequence
MSLSRLIIHQ FRNINSATLD FNPKINVVVG PNGSGKTALL EAIYFLGLGR SFRTHLTSRV 
VEHESKSFTL FSEIQNNNGS IPIGLQKSKS GETLLKINGS YCKKLANLTQ YLPLQLITPE
GYTLLSGSPK NRRAFLDWGV FYHDPIFYPN WSRIKRLLKQ RNAALKQCKT YNELQIWDNE
LCILSEEISQ QREAYFELLM PLVKQTLADF LPDFSITSQF FCGWDKNNKS LQDYLFDNFY
RDKQIGYTSA GPQKADLRFK INGIPVSDVL SRGQLKLFVY ALRLAQGLFL NSFDNKQCVF
LIDDFSSELD QNKQQILAKH IINSNAQIFI SVIAAENIDR LFGQEQTVFH VEHGKITVE