Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3612 |
Symbol | |
ID | 4625126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 4426636 |
End bp | 4428003 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639798728 |
Product | tRNA modification GTPase TrmE |
Protein accession | YP_944894 |
Protein GI | 119947214 |
COG category | [R] General function prediction only |
COG ID | [COG0486] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAAG CTATTGATAC AATTGTTGCT CAAGCAACCG CACCCGGTCG TGGTGGTGTT GGTATTATTC GCATTTCAGG GCCAGATGTA GAAGCGGTCG CAAAAGTTAT TTTAGGAAAA GTCCCTAAAC TGCGTTTTGC CGAATATTTA TCCTTTAGCG ATCAGCATAA TGAAGTGCTG GATCAAGGTA TCGCCCTGTT TTTTAAAGCG CCCAATTCAT TTACAGGTGA AGATGTACTG GAACTCCAAG GGCATGGTGG TCCGGTGGTG ATGGATATGC TTATTAAGGC AATTTTAAGC ATAAAAAATC TTCGTGGAGC CAATCCTGGA GAGTTTTCAG AACGTGCATT TATGAATGAT AAACTCGATT TGGCACAAGC TGAAGGGATT GCTGATTTAA TTGAAGCAAC CTCAGAACAA GCCGCTAAAA GTGCGCTGCA CTCTTTACAG GGTGAATTTT CAGAGAAAAT AGAGCAGCTT GTTGAAAGCC TTATCTATTT ACGCATTTAT GTTGAAGCCT CTATTGATTT CCCTGAAGAG GAAGTCGATT TCTTAAGTGA CGGTAAAATT TCTAAAGGTT TATACCAAAT AATTGATAAT CTGGAAGCGG TAAAAAAGCA GGCCAAACAG GGCGCTATTT TACGTGATGG CATGAAGGTT GTTATTGCAG GACGACCCAA TGCCGGTAAA TCAAGTTTAT TAAACAGCCT GGTGGGTGTC GAGCGCGCCA TAGTGACCGA CATTGCCGGT ACCACCCGTG ATGTGATGCG CGAACATATT CACATAGATG GTATGCCATT ACATATTATT GATACTGCGG GTCTGCGTGA AGGTGCGGAT GAAATTGAAA AAATAGGCAT TGAGCGTGCC TGGCAGGAGA TAACAACAGC GGATCGTATC CTTTTTATGC TTGATGCCAC CACCACCAGT GCTGAAGATC CTCGTCAAAT TTGGCCAGAT TTTATTGATA AGCTGCCCAA ATCTGTAGGT TTAACCGTCG TACGTAATAA AGCGGATCTG ACTGGAGAGG CCTTCTCTAT GACTGAAAAC CATGATCACC CCGTTTATCG TATTTCAGCG AAAACCGGCC AGGGGGTGGA CTTATTAAAA GAACATCTTA AAGATATTAT GGGTTATCAG GGCCATACCA CCAGTGGTTT TATGGCAAGA CGTCGCCATT TAGAGGCCAT TGATAACGCA CAGCGTCATT TGCTGGAGGG CAAAGTCCAA CTGGAAGAGT ATAAAGCGGG TGAATTATTA GCCGAAGAGT TAAGATTAAC CCAACAATAC CTGAGTGAAA TTACCGGCGC ATTCAGTTCC GATGATCTGC TTGGCAAAAT TTTCTCAAGC TTCTGTATTG GCAAATAA
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Protein sequence | MIKAIDTIVA QATAPGRGGV GIIRISGPDV EAVAKVILGK VPKLRFAEYL SFSDQHNEVL DQGIALFFKA PNSFTGEDVL ELQGHGGPVV MDMLIKAILS IKNLRGANPG EFSERAFMND KLDLAQAEGI ADLIEATSEQ AAKSALHSLQ GEFSEKIEQL VESLIYLRIY VEASIDFPEE EVDFLSDGKI SKGLYQIIDN LEAVKKQAKQ GAILRDGMKV VIAGRPNAGK SSLLNSLVGV ERAIVTDIAG TTRDVMREHI HIDGMPLHII DTAGLREGAD EIEKIGIERA WQEITTADRI LFMLDATTTS AEDPRQIWPD FIDKLPKSVG LTVVRNKADL TGEAFSMTEN HDHPVYRISA KTGQGVDLLK EHLKDIMGYQ GHTTSGFMAR RRHLEAIDNA QRHLLEGKVQ LEEYKAGELL AEELRLTQQY LSEITGAFSS DDLLGKIFSS FCIGK
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