Gene Ping_3592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3592 
Symbol 
ID4625178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4407133 
End bp4407495 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content36% 
IMG OID639798708 
Productsurface presentation of antigens (SPOA) protein 
Protein accessionYP_944874 
Protein GI119947194 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1886] Flagellar motor switch/type III secretory pathway protein 
TIGRFAM ID[TIGR02480] flagellar motor switch protein FliN 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCCT TAGATAATGA TTTAGATAAT GAATTTGATT TAGATGATAT GGATTTTGAT 
CTGATTAATG ATGTTAATGA TATTAGTGAT GCGCCCCCCT CCTCTTCAGC CAAAAAGGCA
AAATCGCTGA GTTTTCTTAA TGATATTCCG GTACATGTAA CGGTCGAAGT CGGTGCCAAA
ACAGTGACTC TGAAGGAATT ATTAGAAATT AAAAATGACT CGGTACTCAT GCTCACTAAA
GAAAATGGAA AAGCGTTAGA TATAAAAGTA AATGGTAAGT TATTTGCTTA CGGTGAAGTG
GTGGTTGCCA ACGGACATTA CGGTGTGAAA ATCACTGATA TTGTCAATAA AGATATTGAC
TGA
 
Protein sequence
MNPLDNDLDN EFDLDDMDFD LINDVNDISD APPSSSAKKA KSLSFLNDIP VHVTVEVGAK 
TVTLKELLEI KNDSVLMLTK ENGKALDIKV NGKLFAYGEV VVANGHYGVK ITDIVNKDID