Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3576 |
Symbol | flgD |
ID | 4625162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 4393725 |
End bp | 4394417 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639798692 |
Product | flagellar basal body rod modification protein |
Protein accession | YP_944858 |
Protein GI | 119947178 |
COG category | [N] Cell motility |
COG ID | [COG1843] Flagellar hook capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCATTAT CTGAAAGCAG TGTATTAGGT GCAGATGTCG CTATTACTCA GATGGCCTCG CAAACTAAGA CGATTGACGC TAATCCCAAT GATAGTAGTT CTCTGAAAAA TGAATTTATT ACCTTAATGG TTGCGCAAAT TCAGAATCAG GATCCCTTAA ATCCCGGCGA TGGGACAGAG TATGTAAGCC AATTAGCACA ATTTTCTCAG GTTGAAAGTG CTGAAAATAT GGTTTCGTTA ATGCAACGTA ATTCGGTGAT GATGGATAAC CTGCAGGTAC TGGCAACAGC TTCACTGGTT GGTCAGGAAG TGATGATCAG AAGTGATAAA TTCAGTGTTG ACGGAGAGCC TGCACAAAAT CTTTCGGGGC AGGTGGTACT AACAAGTCCT TCATCGCAGG TCAATTTATT AATTAACGAT CAATTTGGTC AGATTAAAAA AGTAGTGCTT GGCCCCCAAG CGGCAGGACA AGTTGATTTT AAATTAGATG TAGAGGCGTT AAATCTTGCC AAGGGAGCTC ACAGTGTCTC GGTCGAGCTG AGCAACGGGC AGGAGTATCA GCCGCAGATA TTACTGAGTG GAAAAATAGA ATCAATTAAT ATTCCTGCTA CGGGGGGGGC TTCAATGATC TCTCTTCGTG GTTTGGGCAG CGTACCATTT TACGATATCA GTCAATTTGG TGGAGCCAAT TGA
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Protein sequence | MALSESSVLG ADVAITQMAS QTKTIDANPN DSSSLKNEFI TLMVAQIQNQ DPLNPGDGTE YVSQLAQFSQ VESAENMVSL MQRNSVMMDN LQVLATASLV GQEVMIRSDK FSVDGEPAQN LSGQVVLTSP SSQVNLLIND QFGQIKKVVL GPQAAGQVDF KLDVEALNLA KGAHSVSVEL SNGQEYQPQI LLSGKIESIN IPATGGASMI SLRGLGSVPF YDISQFGGAN
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