Gene Ping_3569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3569 
Symbol 
ID4625193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4387356 
End bp4388720 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content42% 
IMG OID639798685 
Productflagellar hook-associated protein FlgK 
Protein accessionYP_944851 
Protein GI119947171 
COG category[N] Cell motility 
COG ID[COG1256] Flagellar hook-associated protein 
TIGRFAM ID[TIGR02492] flagellar hook-associated protein FlgK 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.303644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATAT ATAATATTGC CCTATCAGGG GTAAGCGCAA ACCGTACAGC TTTAAATATA 
ACGGCTCAAA ATATAGCAAA TGCAAATACT GCGGGTCATT CTCGTCAGCA GGCAGTACAA
AGCAGTATTA CTCGCTCTAA TGATGTCGGG GCTGGTGTGG AGGTTTCAAG TATCCGCCGT
ATGGCAGATC AATTTATTAT TTCTCAGCTG CGCAGCAGCA ATACCGAACT GGGTAACAGT
AGCTACAGTG CGTCAAGCCT TGGCCAGCTG GAACAGATTG TCGGGTTGGA CGGATTTAAT
CTTTCAGCTG GAATGGATCA GTTTTTTAGC AGTATCAGTG AAGCGAGTGT TGCGCCGGAA
TCCGTCGAGT TTCGTCAGCA GGTTTTATCT GATGCACAGG CACTTGCTCA GCGTTTTAAA
GGGTTGAGCC AGACACTGAG CAATCAGAAT GCGCAGTTAG CGAGCGACAG AGAAAATAAC
CTTTCTATGG TCAATGGACT GCTTGATAAC CTTGCTCAAA GCAGCAAAGC TATTATGGAA
GTTTATAATG TTGGCGGAAA TACTGCAACG CTTGAAGATA ACCGCGATCA GATGCTAAAT
GAATTATCAC AGCTGATAAA GGTTAATGTA AATAAAGAAG AAAATGGTGA ATTGCAACTA
TCAACGAACA ATGGTCAACC ACTGCTTATT AATGATAAAG CGGCAGAGTT TACAACGACT
CCATTACCTT CTGATCCTTA TCAGGCGATT ATCAATGCTA CTTTCAACGG TTCTACTTTC
AATGTCTCGA GCGATCTCGG TGGGGAGTTG GGAGCAATCG ACAAGACACA GAAAAAAGAT
CTGGCAGCGC TGCACAATAC GATTAACGAG ATGGCTGTTA TTGTTGCCGA TGAGGTTAAT
AAAAGCTTAG CGAGTGGTAC CGATCTTAAC GGACTTTCAC CCGGTCTGGC TCTTTTTTCC
TACGATCCTG CTAATCCGGC AGGCAGTATG CAAATGAACT TATTGTCGAC GGATGAATTA
GCGTTTTCAG GTGATGGTAA TCCAGGTGAT GGTCAAATAC TGGCAAATCT GCTTGATATT
TCAAAAACTG ATTTTTCTAT CACAGGGGCG GGTAATATTA ATCTTTCGGA AGCTTTTAGT
TTAAGCGTTG GCAAGATTGC CATTGACAGC CGGCAAGCAC AGCAAAATTT AGATTCTAAT
ACCGCCTTGT TTAATCAGGT GCAGGCATCA AGAGAAAATC TAAGTGGGGT TAACAGTGAT
GAAGAAGCTG CTAATTTAAT GATCTATGCC AATGCTTATG AAGCAAATAT GAAAGTTATC
AGCACTGCAA ATCAGATGTT TAATAGTATT CTTCGCGCTT TTTAA
 
Protein sequence
MSIYNIALSG VSANRTALNI TAQNIANANT AGHSRQQAVQ SSITRSNDVG AGVEVSSIRR 
MADQFIISQL RSSNTELGNS SYSASSLGQL EQIVGLDGFN LSAGMDQFFS SISEASVAPE
SVEFRQQVLS DAQALAQRFK GLSQTLSNQN AQLASDRENN LSMVNGLLDN LAQSSKAIME
VYNVGGNTAT LEDNRDQMLN ELSQLIKVNV NKEENGELQL STNNGQPLLI NDKAAEFTTT
PLPSDPYQAI INATFNGSTF NVSSDLGGEL GAIDKTQKKD LAALHNTINE MAVIVADEVN
KSLASGTDLN GLSPGLALFS YDPANPAGSM QMNLLSTDEL AFSGDGNPGD GQILANLLDI
SKTDFSITGA GNINLSEAFS LSVGKIAIDS RQAQQNLDSN TALFNQVQAS RENLSGVNSD
EEAANLMIYA NAYEANMKVI STANQMFNSI LRAF