| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3565 |
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| Symbol | fliF |
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| ID | 4625189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 4383228 |
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| End bp | 4384976 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639798681 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_944847 |
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| Protein GI | 119947167 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACACT CAATGCCCGC CCGTAAAAAT ACACTACCGG GTAACTTAGC AGACAAAAGC
GGCGAAGCAA ACGGCCGATT TGTAAATAGA AAAACAGGCA AGGGAGTTGC TGAAGATACC
CTTTTTTCGG CATTAAGCGT CTGGGGAAAA ATACTTTATT TGTTAAAAAA CTCACGTAAA
AGTTTTGCTG TTATCACGGT ATTTTTAACT GCACTAGTGA CCATACTGGT TATTTTATTA
TGGTCATCCT CAAGCAACTA CCGTCCGCTT TACGGTATAC AGGAGCCCTA TAATAACAGT
GATATTCTGG CTGCATTAGA AGCTGAAAAC ATAAAATATC AAATGCAGCC CGATACCGGT
CTGATTTTAG TTGAAGATGG CGAAGTTGCA AAAATTAGAA TGTTACTCGC GGCAAAGGGC
GTAAAAGCAA CACTCCCCGA AGGTTTGAGC GTGCTTGGAA AGCAATCTGC ACTAGGTACA
AGTCAGTTTA TTGAGAATGC GCGATATAAT CTTGGTCTTG AGGGGGAACT GGCTAAAACT
ATTATGTCAC TGAATGCGAT TAATAATGCC CGAGTGCATT TAGCTATTCC TAAGGAAAAT
TTGTTCGTCG GCCGAGGCGA TAATATTGCG ACCGCAGCGG TAATGCTGGA TGTTAAATCC
GGCGATAAAC TGAGTGTTGC ACAGATTACT TCTATTATGA ATCTGGTCGC CGGCAGTGTG
AATAATCTCA ATCCGGAATC TGTTTCAATT ACCGATCAAT CGGGTCGTTT ACTCAGTGAT
GATGTTAATG ATGGCGAATA TTCATTAGCG TCGTCTAAAC AGTTAGAGTA TAAAGCAGGC
ATTGAACAGC AGATCAAGAA ACAAGCAAAA TCGATGTTAA TCCCGATTCT TGGTGAGAAT
AACTTCCGTA TTGAAAGTGC TGCGGATATC GATTTTTCGA AAAAACAAGA AACCATGGAA
AGGTTTGATG CTACGCCAGT TTTGCTCAGC GAAATGAGTA TTGAGGATGA CGATCAGTCA
GATATTGCGA TCGGGATTCC CGGATCATTA AGTAGCACTC CACCGGTGGT TGATGGACAA
GAAAGTACAC CCAACAACAG TAAAAAGAAA TTGCGCCGTG AATTAAATCG AAAATATGCC
GTTGGCAGTT CAGTCACTCA TACGGAATAT CAGCAGGGCA AGATTAATCA TATTTCATTA
TCTGTGGTCA TTAATAAAGA TATTGCCCCG GATGGTGAGT GGACAGCTGA TGAGTTGTCA
AAAATAAATG CAATGATCTC TAGCGCGGTA GGGCTTGATT TGAACAGGGG TGACAGCATT
AATGTCACTA GTTTTACATT TTCACCCATT CAGGTCACCA ATCCCGTTGC TGCAGCCTGG
TATGAAGAAA CCAGGTGGCA ATCGTTACTG AAAATAATTA TCAGTGGCTT AGTCGCAATG
ATGCTGATTA TTGTGGTGTT AAGACCGTTG ATTAAACATA TTACTGTTAA TAATTCAGCG
AAGGATGCCG GACCATTACC AGCAGAGCAT CAAGCAATTG CGCAAAGTAC GCAGGATAAA
GAAAAAGAAT TTGCACAGCG TTTAGCTGAA TATGGAATTG GTGAGACTGC CAGCGGTAAT
GATTCAATGA TGCAGATGCT GCCGAGTCCA AACTCACCGC TTAGTGTTCA AATTCAGCAT
TTGCAGCTTA TCTCCAAAGA ACACCCAAAT CGTGTCAGTG AAATATTGAA AAATTGGGTT
AACGCATAA
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| Protein sequence | MEHSMPARKN TLPGNLADKS GEANGRFVNR KTGKGVAEDT LFSALSVWGK ILYLLKNSRK
SFAVITVFLT ALVTILVILL WSSSSNYRPL YGIQEPYNNS DILAALEAEN IKYQMQPDTG
LILVEDGEVA KIRMLLAAKG VKATLPEGLS VLGKQSALGT SQFIENARYN LGLEGELAKT
IMSLNAINNA RVHLAIPKEN LFVGRGDNIA TAAVMLDVKS GDKLSVAQIT SIMNLVAGSV
NNLNPESVSI TDQSGRLLSD DVNDGEYSLA SSKQLEYKAG IEQQIKKQAK SMLIPILGEN
NFRIESAADI DFSKKQETME RFDATPVLLS EMSIEDDDQS DIAIGIPGSL SSTPPVVDGQ
ESTPNNSKKK LRRELNRKYA VGSSVTHTEY QQGKINHISL SVVINKDIAP DGEWTADELS
KINAMISSAV GLDLNRGDSI NVTSFTFSPI QVTNPVAAAW YEETRWQSLL KIIISGLVAM
MLIIVVLRPL IKHITVNNSA KDAGPLPAEH QAIAQSTQDK EKEFAQRLAE YGIGETASGN
DSMMQMLPSP NSPLSVQIQH LQLISKEHPN RVSEILKNWV NA
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