| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3553 |
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| Symbol | |
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| ID | 4625267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 4370726 |
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| End bp | 4372453 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639798669 |
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| Product | PTS system fructose-specific IIBC protein |
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| Protein accession | YP_944835 |
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| Protein GI | 119947155 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component
[COG1445] Phosphotransferase system fructose-specific component IIB |
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| TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component
[TIGR01427] PTS system, fructose subfamily, IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.869517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTAG CGATAGTCAC AGCATGCCCC AGCGGCATTG CCAACAGTAT TATTGCTGCT
GGTTTAATTG AAAAAGCAGT CTCAACATTA AACTGGGAAG CGACAATCGA ATGCCAGTCT
AGCGTCAAAT CGGTACAAAT TTTAACACAA CAACAAATTG ATCAAGCCGA CTGTATCGTG
ATTGCTGCGA ATACAACGGT TGATCTTAGC CGCTTTCAGG GTAAAAAAGT GTATCAATCT
GATATTACGG AATGCCTGGA AAATACAAAA AACTATCTGG AGAACGCAGT TAACAAAGCA
CAACTGCTTA TCCAACCCAT AACGAGGAAG ACCACTATGT CAACAACTAA AAAAATTGTT
GCAATTACAG CCTGCCCAAC GGGTGTTGCA CACACCTTTA TGGCAGCAAC TGCCTTAGAA
GATAAAGCTA AAGAGCTTGG TTATGAAATT AAAGTTGAAA CACGCGGCTC AGTCGGTGCA
AAAAACCAGT TAACCGCAGA AGATATTAGC GCGGCTGATC TGGTTATTAT TGCCGCAGAT
ATTAGCGTTG ATTTAGCCCG TTTTGATGGC AAAAAATTGT ATAAAACCAG TACTGGTTTA
GCCCTTAAAA AAACCGAGCA AGAGATCAAC AAAGCATTTT CTGATGCAGC GATTTATCGC
AGCACAGGTG CAGCGGCAAG CAGTGATGGT GAGCAAATGA AAGCATCGTC TGCTATCTAT
AAACACCTTA TGTCCGGTGT TTCTCATATG TTACCTGTGG TTGTTGCGGG TGGTTTATTA
ATTGCGTTGT CTTTTGTCTT TGGTATCGAA GCCTTTAAAG AGGAAGGTAC ACTTGCAGCG
GCATTAATGA CTATCGGCGG AGCTTCCGCT TTTGCGTTGA TGATTCCGGT ATTATCTGGT
TTTATTGCCT TTTCGATTGC CGACAGACCC GGTCTTGCAC CCGGTTTAAT TGGCGGTATG
TTAGCAAGTT CAACGGGAGC GGGTTTCCTT GGTGGTATCA TTGCAGGTTT CCTAGCAGGT
TACACAGCAA AATGGGTTGC CGATAATTTC CCATTGCCAG ATTCTATGGC GGCGCTAAAA
CCCATCTTAA TTATTCCTTT GATTGCCAGC TTAGTAACAG GTTTAGTGAT GATCTATGTG
GTCGGTACGC CAGTGGCTGC AGTCATGGCC GGACTAACTG ACTTCCTACA AACCATGGGC
TCAGGAAATG CTGTCCTATT AGGTATTCTT CTTGGCGCAA TGATGTGTTT CGACCTTGGT
GGTCCAGTCA ACAAAACAGC CTATACCTTT GGCGTGGGTC TATTGGCATC ACAAACTTAT
GCACCTATGG CGGCGATTAT GGCTGCGGGT ATGGTACCGG CTCTAGGTAT GGGTCTAGCA
ACATTCTTAG CTAAATCTAA ATTTATCGCA AGTGAAGCCG AAGCGGGTAA AGCATCATTC
GTATTAGGTC TTTGCTTTAT CTCTGAAGGT GCTATCCCCT TTGCCGCACA TGATCCATTA
CGCGTAATCC CTTGTTGTAT GGCCGGTGGC GCGTTAACAG GTGCACTGTC TATGTTATTT
GGTGCACAAC TACTAGCGCC ACACGGTGGT TTATTCGTAC TGCTTATACC GGGTGCTATC
TCACCAGTCC TACTTTACTT AGTAGCGATT GCAGCAGGAA CAGCAGTGAC TGGTATCAGT
TACGCCTTCC TTAAGAAAAG CGACCGTAAA GAAGCCGTTG CAGCTTAA
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| Protein sequence | MKLAIVTACP SGIANSIIAA GLIEKAVSTL NWEATIECQS SVKSVQILTQ QQIDQADCIV
IAANTTVDLS RFQGKKVYQS DITECLENTK NYLENAVNKA QLLIQPITRK TTMSTTKKIV
AITACPTGVA HTFMAATALE DKAKELGYEI KVETRGSVGA KNQLTAEDIS AADLVIIAAD
ISVDLARFDG KKLYKTSTGL ALKKTEQEIN KAFSDAAIYR STGAAASSDG EQMKASSAIY
KHLMSGVSHM LPVVVAGGLL IALSFVFGIE AFKEEGTLAA ALMTIGGASA FALMIPVLSG
FIAFSIADRP GLAPGLIGGM LASSTGAGFL GGIIAGFLAG YTAKWVADNF PLPDSMAALK
PILIIPLIAS LVTGLVMIYV VGTPVAAVMA GLTDFLQTMG SGNAVLLGIL LGAMMCFDLG
GPVNKTAYTF GVGLLASQTY APMAAIMAAG MVPALGMGLA TFLAKSKFIA SEAEAGKASF
VLGLCFISEG AIPFAAHDPL RVIPCCMAGG ALTGALSMLF GAQLLAPHGG LFVLLIPGAI
SPVLLYLVAI AAGTAVTGIS YAFLKKSDRK EAVAA
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