Gene Ping_3547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3547 
Symbol 
ID4625261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4364801 
End bp4365532 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content49% 
IMG OID639798663 
ProductLamB/YcsF family protein 
Protein accessionYP_944829 
Protein GI119947149 
COG category[R] General function prediction only 
COG ID[COG1540] Uncharacterized proteins, homologs of lactam utilization protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTA ATTGCGATAT GGGAGAAAGT TTTGGTATCT GGGAAATGGG CTTAGATGAA 
GCGGTGATAC CTTGGATTGA TATGGCTAAT ATCGCCTGCG GATTCCATGC ATCGGATCCG
GATGTGATGG CCAAAACCGT TCAGTCAGCC GTTAAAAAAA ACGTCCAGAT TGGTGCCCAC
CCCGGGTATA ACGATAAAAT AGGTTTTGGA CGACGCAGTA TTCCCCATAC CCAAAAGCAG
ATATCCCACT TGATCGCCTA CCAGACCGGT GCCCTGCAAG CAATCTGCCA GCTCTATGGC
GGTAATGTTG AATATGTCAA ACCCCATGGT GCGCTGTATA ACGATATGAT GGTCGATCAA
GATATTTTTC GCGCCGTTAT TGACGGTCTG ACCAAGCTGT CTCCCCGGCC GGCGCTGATG
ATCCTCGCCC AAACGGATAA TAGCCTTTAC AAGGGTATTG CTGATCAGGC GGGCGTGCGC
TTAATTTTAG AAGCCTTTGC CGACAGGGCC TACACACCTG AAGGCCGACT TGCTCCGCGC
TCACAAGCAG GTGCGGTATA TCATTGCCCA GAGCAAATTA TCAAACAGGT TATGCAATTA
GCCAAAAATG GTTGTGTTAC CACAATCGAG GGCGGCCAAC TGCAGCTTAA CGCTGATAGT
GTCTGTGTTC ATGGTGACAA TCCGGAGTCG GTAGCAACAG TCGAGCAACT ATTCAGGGCA
CTGAACCCAT GA
 
Protein sequence
MKLNCDMGES FGIWEMGLDE AVIPWIDMAN IACGFHASDP DVMAKTVQSA VKKNVQIGAH 
PGYNDKIGFG RRSIPHTQKQ ISHLIAYQTG ALQAICQLYG GNVEYVKPHG ALYNDMMVDQ
DIFRAVIDGL TKLSPRPALM ILAQTDNSLY KGIADQAGVR LILEAFADRA YTPEGRLAPR
SQAGAVYHCP EQIIKQVMQL AKNGCVTTIE GGQLQLNADS VCVHGDNPES VATVEQLFRA
LNP