Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3504 |
Symbol | |
ID | 4625538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 4332705 |
End bp | 4334033 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639798620 |
Product | preprotein translocase, SecY subunit |
Protein accession | YP_944786 |
Protein GI | 119947106 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00370905 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000000664102 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGCTAAGA AACCAGGATT AGATCCTAAA GCGGCACAGG GCAGTAAATT GAGTGAGCTT AAAACACGAC TTTTGTTTGT TTTGGGTGCT ATTTTAGTGT TCCGTGCAGG TTCTTTTGTT CCAATTCCTG GTATTGACGC CGCTGTCCTG GCTGATCTGT TCCAACAGCA AAAGGGCACT ATCATAGAGA TGTTTAACAT GTTCTCTGGT GGTGCGCTTG CGCGTGCATC TATCTTCGCA TTGGGTATTA TGCCGTATAT TTCGGCTTCT ATTATTATCC AATTGATGAC CGTTGTTCAT CCTCCTTTAG CTGAGCTAAA AAAAGAGGGT GAATCAGGTC GTCGTAAGAT AAATCAATAC ACGCGTTACG GTACTTTGGT ATTAGGTACA TTCCAAGCGA TTGGTATTGC GACTGGTTTG CCATCGATGA TGCCCGGACT TGTTGAAAAT GCAGGCCCGA GCTTTTACAT CACGGCAGTT GTGAGTCTAG TGACAGGAAC TATGTTCCTT ATGTGGTTAG GTGAACAAAT AACAGAACGT GGTATTGGTA ATGGTATTTC TATCATTATC TTTGTAGGTA TTATTGCTGG TCTGCCTCAA GCAATTGGGC AAACAGTAGA GCAAGCACGA CAAGGTGAGA TTCACCTTCT AGTGTTATTA GCATTAATTG TTATCGTTTT TGCGACAACC GCATTTGTTG TGTTTATTGA ACGTGGTCAA CGACGAATCG TTGTTAACTA CGCTAAACGT CAACAGGGGC GAAAAGTTTT TGCTGCTCAA AGTACGCATC TGCCATTAAA ATTAAATATG GCTGGTGTTA TTCCTGCAAT TTTTGCTTCA AGTGTTATTT TATTCCCAGG TACAATCGCG CAGTGGTTCG GTCAGACTGA AGGTTTAGGT TGGTTAACGG ATGTTTCATT GGCCTTACAG CCAGGGCAAC CGTTGCATAT GATGTTATAT GCAGCCGCTA TTATCTTCTT TTGCTTCTTT TATACTGCAT TGACGTTTAA TCCACGTGAA ACAGCAGATA ATTTGAAGAA AAGCGGTGCC TTTATTCCAG GTATACGTCC CGGAGAACAA ACATCGCGTT ACATTGATAA AGTAATGACC CGTTTAACAC TAGCTGGTGC GTTATATATT ACCTTTATCT GTTTGATTCC CGAGTTTATG ATGGTAGCAA TGAATACTCA GTTCTACTTC GGTGGTACTT CGTTATTAAT TATTGTGGTT GTTATCATGG ACTTTATGGC ACAGGTTCAG ACTCATTTGA TGTCCAATCA ATATGACTCT GTCTTGAAAA AAGCTAACTT GAAGGATTAC GGTAAATAA
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Protein sequence | MAKKPGLDPK AAQGSKLSEL KTRLLFVLGA ILVFRAGSFV PIPGIDAAVL ADLFQQQKGT IIEMFNMFSG GALARASIFA LGIMPYISAS IIIQLMTVVH PPLAELKKEG ESGRRKINQY TRYGTLVLGT FQAIGIATGL PSMMPGLVEN AGPSFYITAV VSLVTGTMFL MWLGEQITER GIGNGISIII FVGIIAGLPQ AIGQTVEQAR QGEIHLLVLL ALIVIVFATT AFVVFIERGQ RRIVVNYAKR QQGRKVFAAQ STHLPLKLNM AGVIPAIFAS SVILFPGTIA QWFGQTEGLG WLTDVSLALQ PGQPLHMMLY AAAIIFFCFF YTALTFNPRE TADNLKKSGA FIPGIRPGEQ TSRYIDKVMT RLTLAGALYI TFICLIPEFM MVAMNTQFYF GGTSLLIIVV VIMDFMAQVQ THLMSNQYDS VLKKANLKDY GK
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