Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3497 |
Symbol | |
ID | 4625531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 4328573 |
End bp | 4329478 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639798613 |
Product | transcriptional regulator, substrate-binding, LysR family protein |
Protein accession | YP_944779 |
Protein GI | 119947099 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.794623 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0000380526 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATTTTA GGGATTTAGA GTACTTAATA GCACTTGAAG AATTAAAACA TTTTCGCAAA GCTGCTGAAA AATGCTTTGT AAGTCAACCG ACGCTGAGCG GTCAAATACG TAAACTAGAA GATGAACTGG GTATACAATT AATGGAACGC TCTCCCCGCA AAGTCCTTTT CACTCCTGCC GGATTGGATA TTGTCGCTAA AGCTAAAACC ATTTTATTAG AAGTAAAATC ATTAAAAGAG ATAGCTAAAA GTTACAACGA ACCGATGCAG GGCACATTAC ATATCGGGCT TATTCCAACT GTAGCCCCTT ATCTGTTACC TTTGATAGTT GCAGTAATAA AAGCGAATTT TCCCGATTTA TCTCTATATC TCTATGAAAA GCAAACTAAT CTGTTATTAA AACAGCTTGA GGAGGGAGAA CTCGATTGCC TGATTCTGGC ACTGTTACCC GGCATGGAAT CCTTTACTCA ATATCACCTC TATCAAGAGC CCTTGGAACT GGCTATCACA GACGTGCACC CATGGGCAAA GCAACCGGAA ATAGAGCTTA ACGGGCTTCG TGGTGAACAT GTTTTAATGC TGGAAGATGG ACATTGCTTA AGGGATCAAA CCAAGGGATT TTGTTTTGCA GCGGGCGCCT TAGAAGATGG CAGTTTTCAA GCGACCAGTC TAGAGACGCT GCGCCATATG ATAAGTGCTG AAAACGGCAT GACGTTATTA CCACAATTGG CCATTCCTGT TAATCGGCAC GAGGGAGGGA TCCAATACAT CCCTTTCAAA AATCCAAAGC CCACCCGTGA AATAAGTTTA TTATGCCGCA AAAATAGTGT TCGCAAGATC TGTTTTGAGC AATTAGCAAA ACTAATCAGC ACAACAGTAC AGGCTAAATT AAAGGAATAT GGGTAA
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Protein sequence | MNFRDLEYLI ALEELKHFRK AAEKCFVSQP TLSGQIRKLE DELGIQLMER SPRKVLFTPA GLDIVAKAKT ILLEVKSLKE IAKSYNEPMQ GTLHIGLIPT VAPYLLPLIV AVIKANFPDL SLYLYEKQTN LLLKQLEEGE LDCLILALLP GMESFTQYHL YQEPLELAIT DVHPWAKQPE IELNGLRGEH VLMLEDGHCL RDQTKGFCFA AGALEDGSFQ ATSLETLRHM ISAENGMTLL PQLAIPVNRH EGGIQYIPFK NPKPTREISL LCRKNSVRKI CFEQLAKLIS TTVQAKLKEY G
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