| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3490 |
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| Symbol | |
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| ID | 4625524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 4318272 |
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| End bp | 4319768 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639798606 |
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| Product | sodium/proline symporter |
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| Protein accession | YP_944772 |
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| Protein GI | 119947092 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.753009 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0181041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGACA ACACTTTTGC CATAGTATCG ACATTTCTAG TGTATCTGGT GGTGATGTTA
CTCATCGGTT ATTACGCATA TAAACGCACC AGCGATACGT CGGATTATTT TTTAGGCGGA
CGTACATTAG GTCCATGGCC TGCAGCATTA TCTGCCGGTG CTTCGGATAT GAGTGGCTGG
TTATTACTGG GTTTGCCTGG TTACGCTTAT GCAGCGGGCA TGGAGTCTTT ATGGCTCGCT
GGTGGACTGT TAATTGGTAG CTGGGCTAAC TGGCTGATCA CTGCAAAACG TCTGCGTACT
TATAGTATTA CGGCCGATGA TGCATTAACT TTGCCGGAAT TTATTGCCCG TCGTTTCAAT
GACAAAACGA AATTGCTGCA AACCCTTTCC GCTTTTTTCA TCCTGATGTT CTTCCTCTTT
TATACCAGCT CAGGTTTGGT TGCCGGTGGT AAATTATTTG AAACTGTCTT TGGTCTAGAT
TATATCTATG CAGTAATTAT CGGTGCTATC TGTATTGTTT CTTATACTCT ATTTGGCGGG
TTTTTGGCCG TCTCATGGAC AGATTTAGTG CAGGGCTTAT TAATGTCAGC AGCACTAGTG
ATTGTACCTA TCGTCGCAAT GCAGGGCGGA TTCGATCAGC TAAGCACTAA TCTAGAAAAT
ATTAATCCGG AACTACTTAC CCTATGGAAT GGTATGGATG GTGAGCCGTT ATCCTGGATT
GCGATTATCT CATTAGTCGC CTGGGGTCTG GGTTATTTTG GCCAACCGCA TATTCTTGCG
CGTTTTCTAG CAACACGCAC AAATAAAGAT TTAACTAAAG CACGCCGTAT CGCGGTGAGC
TGGACTATTA TCTCTATCTT TGGTTCGGTT ATGGTGGGTA TTGTTGGTCT GGTCTTTGTG
CAAAATCAGG TGGGCATGCA AGTCGCTGAT GGCGAAAAGA TCTTTATGGT GTTAGTTAAT
GCTGTCTTTC ATCCGATCCC TGCCGGTATT TTGTTAGCCG CTATTCTTGC CGCTATTATG
AGCACCGCTG ATTCGCAGTT ATTAGTCTCC TCTTCAGCAT TAGCAGAAGA CTTTTACAAG
CAACTTCTCC GCCCTCAAGC TTCGTCAAAA GAAGTGTTGA TGGTTGGACG TATCGGTGTA
ATTCTATTAG CACTATTAGC CTTGTATTTC GCAATGGATC CTGATAGTTC GGTACTTAGC
TTAGTTTCCT ATGCCTGGGC TGGTTTCGGT GCTGCATTTG GTCCGGTATT AATATTAAGC
ATATACTGGA AACGAATGAA CGGAAAGGGT GCTTTAGCAG GTCTTCTTGT CGGTGGTATC
ACTATTGTTG TCTGGAAGCA GTTAACAGGT GGTATTTTTG AAGTGTATGA GATTGTACCG
GGAATAATTT TTGCTTCTGC GGCAATTGTT ATCACCAGTT TAGTCACTGC TCCGCCGGAA
AAAGCGGTAA CAGATAAGTT TGAAGAATTT GAAAGAAACT TAAAAACATT TAAATAA
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| Protein sequence | MADNTFAIVS TFLVYLVVML LIGYYAYKRT SDTSDYFLGG RTLGPWPAAL SAGASDMSGW
LLLGLPGYAY AAGMESLWLA GGLLIGSWAN WLITAKRLRT YSITADDALT LPEFIARRFN
DKTKLLQTLS AFFILMFFLF YTSSGLVAGG KLFETVFGLD YIYAVIIGAI CIVSYTLFGG
FLAVSWTDLV QGLLMSAALV IVPIVAMQGG FDQLSTNLEN INPELLTLWN GMDGEPLSWI
AIISLVAWGL GYFGQPHILA RFLATRTNKD LTKARRIAVS WTIISIFGSV MVGIVGLVFV
QNQVGMQVAD GEKIFMVLVN AVFHPIPAGI LLAAILAAIM STADSQLLVS SSALAEDFYK
QLLRPQASSK EVLMVGRIGV ILLALLALYF AMDPDSSVLS LVSYAWAGFG AAFGPVLILS
IYWKRMNGKG ALAGLLVGGI TIVVWKQLTG GIFEVYEIVP GIIFASAAIV ITSLVTAPPE
KAVTDKFEEF ERNLKTFK
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