Gene Ping_3487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3487 
Symbol 
ID4625521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4315368 
End bp4316438 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content39% 
IMG OID639798603 
Productsensor histidine kinase 
Protein accessionYP_944769 
Protein GI119947089 
COG category[T] Signal transduction mechanisms 
COG ID[COG3852] Signal transduction histidine kinase, nitrogen specific 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0596493 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAATA ATCATTCAAA CTCACTTGCA GTTGCCATAC TTGAAGAAGC GAATACTGCC 
TTTGTTATTA TTAACGCAAA ATTAAAACTG ATCTATGCAA ATCCAGCGAG TGAGGTTTTA
TTGTCACAAA GCAAACAACG TCTTTACCAG CAAAGTTTGC AGCAACTGGC AAATCATTAT
CACTTTGATC CCACCTATAT TGAAGCTGTT TTTACCAAAC AAAATGCGTT CACTGACAGT
GAAACGACCT TAATGGTTGA TGGTCATCCT CTTTTAATGG CATTAAGTGC CACCTATTTA
GAGTTTGAAA ATCAGAATTA TGTGATCATT GAGATGCACT GTATTGGACA GCAGCGTAAA
ATAAGCCAAT TTCATTATCA AGATCATCAA CAAAAAGTCG CAAAAGAACT TGTTCGCGGA
CTTGCTCATG AAATAAAAAA TCCACTCGGA GGCCTACGCG GTGCGGCACA ATTATTAGAA
AGTGAACTGG CAGATCCTGA ACTTAAAGAG TTTACCCAAA TAATTATTGA ACAAGCGGAT
CGTCTAAGCG CATTAGTTAA TCGTTTATTA GGCCCGCAAA CCTTGGGAGA GCGCTCCTAT
CATAATTTAC ATTCTGTGCT TGAAAAAGTG CGGAAATTAG TCTGTTTGGG GCTTCCTGAG
CATATCCACA TCAAAATTGA TTATGATCCG AGCATTCCAG ATTTTGAAAT GCAGCCGGAT
CAACTGCAGC AAGCATTCTT AAATATTCTT CAAAATGCAG TGCAATCACT GAGTACTCAG
CCGGAGAAAA ACTTAGAAAT AATTATCAAA ACGCGTACTG CCCACCAAGT TATTATTCAT
GGTGTATTAC AACGCTTAGC GGCTGAAATT TCAATTATTG ATAATGGCCC AGGTGTCCCT
GAGCATTTAA AAGATACCTT ATTTTACCCT ATGGTAACGG GTCGCTGTGA TGGTACGGGA
TTGGGGCTAT CTATTGCTCA GGAGCTTATT AACCAAGAGA GAGGACGTAT CGAATGCGAC
AGTATGGAAG GTCATACTGA GTTTCTTATC TATCTGCCTT TAACAATTTA A
 
Protein sequence
MLNNHSNSLA VAILEEANTA FVIINAKLKL IYANPASEVL LSQSKQRLYQ QSLQQLANHY 
HFDPTYIEAV FTKQNAFTDS ETTLMVDGHP LLMALSATYL EFENQNYVII EMHCIGQQRK
ISQFHYQDHQ QKVAKELVRG LAHEIKNPLG GLRGAAQLLE SELADPELKE FTQIIIEQAD
RLSALVNRLL GPQTLGERSY HNLHSVLEKV RKLVCLGLPE HIHIKIDYDP SIPDFEMQPD
QLQQAFLNIL QNAVQSLSTQ PEKNLEIIIK TRTAHQVIIH GVLQRLAAEI SIIDNGPGVP
EHLKDTLFYP MVTGRCDGTG LGLSIAQELI NQERGRIECD SMEGHTEFLI YLPLTI