Gene Ping_3451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3451 
Symbol 
ID4625569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4267010 
End bp4267561 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content40% 
IMG OID639798568 
ProductNusG antitermination factor 
Protein accessionYP_944734 
Protein GI119947054 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0281776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0124295 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAG AGCTACAAAA AAAGAGATGG TATGTGGTGC AAGCATTTTC AGGCTATGAA 
GGGCGTGTAC AAAAAACATT ACTTGAATAT ATTAAATTAA ATGAAATGGA AGACTACTTC
GGCCAAATTC TAGTCCCAAC TGAAGAAGTT GTTGAGATGC GCGCCGGACA AAAACGTAAA
AGTGAACGTA AATTCTTTCC AGGCTACGTG TTAGTTGAAA TGGCGATGAA TGATGATAGC
TGGCATTTAG TGAAAAGTAT TGACCGCGTG ATGGGATTCA TCGGCGGCAG TAAAGAGCGT
CCAGCACCGA TTTCTCAAAA AGAAGTGGAT AATATTCTTA ATCGTCTTCA AGAATCGCAT
GATTCTCCAC GACCAAGAAC ATTGTTTGAA GCCGGTCAGA TTGTACGTGT TACTGAAGGT
CCTTTTGTCG ACTTCACCGG AACGGTTGAG AAAGTTGACT ATGAAAAGAG CCGTTTGAAA
GTATCTGTTT CTATCTTCGG TCGTGCAACA CCCGTTGATT TAGACTTTTC TCAAGTAGAA
AAAGACAGTT AA
 
Protein sequence
MSEELQKKRW YVVQAFSGYE GRVQKTLLEY IKLNEMEDYF GQILVPTEEV VEMRAGQKRK 
SERKFFPGYV LVEMAMNDDS WHLVKSIDRV MGFIGGSKER PAPISQKEVD NILNRLQESH
DSPRPRTLFE AGQIVRVTEG PFVDFTGTVE KVDYEKSRLK VSVSIFGRAT PVDLDFSQVE
KDS