Gene Ping_3448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3448 
Symbol 
ID4625602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4264925 
End bp4265428 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content45% 
IMG OID639798565 
Productribosomal protein L10 
Protein accessionYP_944731 
Protein GI119947051 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0244] Ribosomal protein L10 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000199113 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00604494 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCATTAG GACTCGAAGA CAAAAAAGCT ATTGTCGCTG AAGTCAACGA AGCTGCTAAA 
ATCGCTTTGT CTGCTGTTGT TGCCAATTCA CGTGGCGTAA CAGTGGGTAA AATGAATGCA
CTTCGTGCAC AAGCACGTGC AGAAGGTGTT AACTTACGTT TAGTACGTAA CACATTAGCA
CGTCGTGCGC TTGAAGGGAC CGATTTTGCA TGTCTTGCAG ATCTGTTTAT AGGTCCTACG
ATCCTTGCTT TCTCAAACGA ACATCCAGGT GCAGCAGCTC GTCTATTAAA AGACTTTGCT
AAAGCTAATG ATCAGTTTGA AATTAAGGGT CTAGCGTTTG AGGGTGAATT TATTGAAGCC
GCTCAACTTG ACCGTCTAGC AACACTACCG ACATACGATG AAGCAATTGC GCAACTGATG
GCGACTATGA AAGAAGCTGC AGCTGGCAAA CTTGTACGTA CTCTGGCTGC AATTCGCGAC
CAGAAAGAAG AATCTGCAGC ATAA
 
Protein sequence
MALGLEDKKA IVAEVNEAAK IALSAVVANS RGVTVGKMNA LRAQARAEGV NLRLVRNTLA 
RRALEGTDFA CLADLFIGPT ILAFSNEHPG AAARLLKDFA KANDQFEIKG LAFEGEFIEA
AQLDRLATLP TYDEAIAQLM ATMKEAAAGK LVRTLAAIRD QKEESAA