| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3379 |
|---|
| Symbol | |
|---|
| ID | 4625694 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 4172531 |
|---|
| End bp | 4173763 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639798495 |
|---|
| Product | aspartate kinase |
|---|
| Protein accession | YP_944664 |
|---|
| Protein GI | 119946984 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0527] Aspartokinases |
|---|
| TIGRFAM ID | [TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000124538 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTAT TAGTTCAAAA ATACGGTGGG ACCTCTGTAG GTAACATTGA GCGCATAAAA
AGCGTGGCTG AAAAAATTAA AGCAACAAAA GCAGACGGTC ACGATGTTGT GGTTGTATTA
TCCGCCATGT CGGGTGAGAC AAATCGTATG ATAGCGCTCG CAAAAGAGAT AACAGCAAAC
CCAAGTCCTC GTGAAATGGA TGTGTTGTTA ACAACTGGCG AGCAAACGAC CATTGCACTT
TTATCAATGG CATTACATAG TTTAGGCCTT GATGCCGTCT CTATGACAGG TGACCAAATC
CGTTTAAAGA CAGACTCCTG TCATAGTAAG GCGCGTATTT TAGATGTTGA AACAAAAAAT
ATTAAGGAGC ATTTAAAACT TGGACGGGTG GTGGTAGTGG CAGGTTTTCA AGGCCGCTCG
GAAACTAATG AGATTACTAC GTTGGGTCGG GGAGGCTCGG ATACATCTGC GGTAGCTATT
GCTGCGGCTT TAAAAGCGGA CGAATGCCAA ATTTATACTG ATGTTGACGG TGTTTATACA
ACGGATCCGC GTGTTGAACC CAATGCTCGC CGTTTAGATA GGATTACCTT TGAAGAGATG
CTTGAAATGG CGAGCTTAGG CGCTAAGGTT TTACAAATTC GCTCAGTCGA GTTTGCTGGA
AAATATAATG TACCACTTCG TGTCCTATCA AGTTTTAAAG ATGGTGGCGG CACGCTAATC
TGTTATGAGG AAAATAAAAT GGAATCTCCT GTCATCTCCG GTATTGCGTT TAATCGTGAT
GAAGCTCGTT TAACCTTATC GGGTGTACCA GATAAACCGA CCGTTGCTGC ACAAATTTTA
TCGCCTATTG GTGATGCTAA TATCGATGTG GATATGATAG TACAAAATAC GCTGGGTAAC
GGGAAAACAG ATTTTACTTT TACTGTGCAT CGTGATGACT ATGAGCAAAC CAAGGAACTA
TTAGAGAAGG TATGTGTCTT ATTACACGCT GATAATGTTC AGGGTAATAA GGAAATAGCA
AAAGTTTCAG TTGTGGGCGT TGGAATGTGG AACCATCCGG GTGTTGCTAA AACCATGTTT
GAAACACTGG GGCAAGAAGG TATTAATATG CACCAAATTG CAACGTCAGA AATAAAAATC
TCAGTTTTGG TTGATAGTAA GTATCTGGAA CTTGCTGTGC GGGCACTGCA TAAAGCATTT
AAACTTGCAG ATGACCCGAC AGAAGAAAAA TAA
|
|---|
| Protein sequence | MALLVQKYGG TSVGNIERIK SVAEKIKATK ADGHDVVVVL SAMSGETNRM IALAKEITAN
PSPREMDVLL TTGEQTTIAL LSMALHSLGL DAVSMTGDQI RLKTDSCHSK ARILDVETKN
IKEHLKLGRV VVVAGFQGRS ETNEITTLGR GGSDTSAVAI AAALKADECQ IYTDVDGVYT
TDPRVEPNAR RLDRITFEEM LEMASLGAKV LQIRSVEFAG KYNVPLRVLS SFKDGGGTLI
CYEENKMESP VISGIAFNRD EARLTLSGVP DKPTVAAQIL SPIGDANIDV DMIVQNTLGN
GKTDFTFTVH RDDYEQTKEL LEKVCVLLHA DNVQGNKEIA KVSVVGVGMW NHPGVAKTMF
ETLGQEGINM HQIATSEIKI SVLVDSKYLE LAVRALHKAF KLADDPTEEK
|
|---|
| |