Gene Ping_3373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3373 
Symbol 
ID4625684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4165579 
End bp4167159 
Gene Length1581 bp 
Protein Length526 aa 
Translation table11 
GC content39% 
IMG OID639798485 
Productglutamate--cysteine ligase 
Protein accessionYP_944658 
Protein GI119946978 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2918] Gamma-glutamylcysteine synthetase 
TIGRFAM ID[TIGR01434] glutamate--cysteine ligase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTCTCA ATTTTAATCA GCGTTTAGCT GTTTTTGAAC AACAATCACA ATCTCTTGAA 
GGTTTTGGCC GTGGTATTGA ACGCGAAGCT TTACGCGTGA CGCCCGATGG GGGCTTATCG
CAAAATAGCC ATCCCTATGC TTTTGGCAGC GCTTTATGTC ACAGTACGAT CACCACTGAT
TATGCTGAAG GCCTATTAGA GTTTATCACC CCCGTCGCTA AAGATGTCGA TCAGCTATTT
GCCTATTTAA ACGATGTTCA CCATTACGCG GCTAAAAATT TAGAAAATAA TGAAACATTA
TGGCCTATCA GTATGCCCTG TTTTATTAAT AATGAAGACT CAGTTGAACT TGCCCAGTTC
GGTTCATCTA ATGTTGGAAA AATGAAAACC GCCTATCGTC AAGGGTTAAA AAATCGTTAT
GGCAGTATGA TGCAGGTCAT CGCTGGTGTG CATTATAACT TTTCATTTCC GGATGGTTTT
TGGGACGCCT GGGCTAAAGC CAATCAATCA CCTTTAACGG GAAAAGAGGC TCAGTCTGCA
GGTTATATGG GGTTAATCAG GAATTACTTG CGTTTTGGCT GGGTTATTCC TTATCTGTTT
GGGGCATCTC CGGCACTTTG TAAATCCTTT TTACAGGGTA AAAAAACACA CTTCAAATTT
AAAGAAACGG GCTCAGGAAC AATTTATTTA CCTTATGCAA CGTCGTTGCG TATGAGTGAT
TTAGGTTATA CAAGCAGTGC TCAATCTTCA CTTGATATTT GTTATAACAG TCTTGATAAT
TATATCGGCT CAGTGCGCAA AGCTTTAACG CAAAAAAATT CAGACTTTGT TCATTTAGGT
ATTAAAGAAA ATGATGAATA TATTCAACTA AATGACAATG TACTACAAAT TGAAAACGAG
CTTTATGCTT CGATTCGTGC AAAACGGGTG CAGAAAGAGG GTGAAACACC TTTGCAGGCA
TTAGATGCGC GCGGTATTGA GTATGTTGAA ATCCGTTCTT TAGATGTAAA TCCATTTTCT
GAAGTAGGTA TCACAGAAGA GCAGGTAAAT TTCTTGGATC TGTTTCTTAC CTGGTGTGCG
ATGACTCCCT CTGAGAGTAT CTCTAAATTA CAATCGCAGC ACTTTTCAGA AAACTTAAAT
AAAGTGGTGA CAGAAGGCCG CCGGCCTAAT TTAATGCTGG AAATCGATGG AAAAGAGCAA
AATGTAGCGG CTTGGGGGGA TTGGTTAACG GGGCAGTTAA AAGAACTTGC TGTTGTCATG
GATAAAGAAA GTGCTTCAGA TCGTTATCAG AATGCCATTG CCCACATTGC GCCTCGCTTT
GCTTCGCCAG AATTAACCAG TTCTGCGCGA ATTTTAGAAA CCCTTAAAGA GGGGGATTTA
GATAACGGCC GGTTAGCATT GAATTTATCG AAAACTTATA AAGAAAAGTT AATAAAGCAG
AACTATCAGG TTTGGTCTGA TGCTTTCTTT GAAAATGAAA AAATAATTTC TGAGAAAAAA
CAGAAAGAAA TAGAAGAAAG TGACAATCTG GATTTTGATG GATACCTGCA GAACTATTTT
TTAAATGCGC AAAAAAAATA G
 
Protein sequence
MSLNFNQRLA VFEQQSQSLE GFGRGIEREA LRVTPDGGLS QNSHPYAFGS ALCHSTITTD 
YAEGLLEFIT PVAKDVDQLF AYLNDVHHYA AKNLENNETL WPISMPCFIN NEDSVELAQF
GSSNVGKMKT AYRQGLKNRY GSMMQVIAGV HYNFSFPDGF WDAWAKANQS PLTGKEAQSA
GYMGLIRNYL RFGWVIPYLF GASPALCKSF LQGKKTHFKF KETGSGTIYL PYATSLRMSD
LGYTSSAQSS LDICYNSLDN YIGSVRKALT QKNSDFVHLG IKENDEYIQL NDNVLQIENE
LYASIRAKRV QKEGETPLQA LDARGIEYVE IRSLDVNPFS EVGITEEQVN FLDLFLTWCA
MTPSESISKL QSQHFSENLN KVVTEGRRPN LMLEIDGKEQ NVAAWGDWLT GQLKELAVVM
DKESASDRYQ NAIAHIAPRF ASPELTSSAR ILETLKEGDL DNGRLALNLS KTYKEKLIKQ
NYQVWSDAFF ENEKIISEKK QKEIEESDNL DFDGYLQNYF LNAQKK