Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3366 |
Symbol | |
ID | 4625677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 4158594 |
End bp | 4159121 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639798478 |
Product | 16S rRNA processing protein RimM |
Protein accession | YP_944651 |
Protein GI | 119946971 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.83337 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCAAAA AAGCAGAACC AATTGTAATC GGTAAGTTTG GTGCGGTTCA TGGTATCAAA GGCTGGTTGA AAGTTCACTC CTACACCGAT GATCCTGAAA GCATTTTTGA ATATAAGCCT TTGTTAATGA AGTCAAAAGG GCAGTTTCAA GAAGTTAATA TAGCTGATTG GAAACGTCAC AGTAATGGTT TTGTTGCAAA AATAGTAGGA TTTGATGTTA GAGAAGAAGC ACAAGCCTTA GTCGGTTTAG AGCTGCTCGT TGACTCAGAT AAGCTTCCTA ATTTGGAAGA GGATTTCTAT TGGCGTGATT TAATCGGGTG TCAGGTTAAA ACTGACAATG GTTACGATCT GGGTGTTGTC ACCGAGATCA TGGAAACAGG CTCAAATGAT GTGCTTGTTG TAAAAGCCAA CTCGAACGAT GCTTTCGGAC AGAAAGAGCG ATTAATCCCG TTCATCGACA AGCAAGTAAT TTCCAACGTG GATATTACAA GCAAATTAAT TCAAGTTAAT TGGGAACCTG ATTTCTGA
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Protein sequence | MSKKAEPIVI GKFGAVHGIK GWLKVHSYTD DPESIFEYKP LLMKSKGQFQ EVNIADWKRH SNGFVAKIVG FDVREEAQAL VGLELLVDSD KLPNLEEDFY WRDLIGCQVK TDNGYDLGVV TEIMETGSND VLVVKANSND AFGQKERLIP FIDKQVISNV DITSKLIQVN WEPDF
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