Gene Ping_3332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3332 
Symbol 
ID4625746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4116643 
End bp4118235 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content46% 
IMG OID639798442 
Producthypothetical protein 
Protein accessionYP_944618 
Protein GI119946938 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00204737 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAC TTAAGACAGA TGACTGTTCC ACGGAAAAGG ACTCTTTGAT CGATCACTAT 
ATGGCTGAGA TTAGAAAGCG CCTGCCGGTT GTAGACAAAA CATTAGAATT GTACGGAGAA
CTGCTGCTGA GCGAATATCT TGATGTGGTG ACTGAAACCG CAAGCGAGCG CTACCAGTCA
GCCGATGATC TGGCTGATGT TGTTTATGAA TATGCCGCAC CGCTGCTAGG TGAAAAAGTC
GCCGCAATGG CGCGGGAGGA GCTGAAACAG AGCCCAGTGG TATTGACGGC TAACCACCAT
GGTGTTGACT ACTTTGCCCA ATCGGTGCAG GGAACGCTGC TGTTCAGCCA GCGCAAACTG
CCCAATGGCC AGAAAGCTAA GACAGTGCCA GTACTGGCCT GTGGCGCTAT TCCATTGAAC
AATATGACTT ATCCGCGTGG GATGTTGTGT TATGATATAA CTGAGTTTAA GCGGGCTGGA
ATCCCTATCC GCTTGCCCCT ATTTCCAAAA CGTCGACAAA ACGAGACTGT CTCGTTGACA
GGACCTTTTG AGAAAGGAGC TGTTGAACGA GCGGAAAAGT CCACTCGTAA AATGGTGGGT
GATCATTTAA TCTCAGCTGC GACTGGCAAG GCGTTAATGT CGGTGTTGGA AGATGAATAT
TCCAGCCCGA GAGTATTGGG CCTTTCTTCC TACTCAGAGC AAGCCGTTGT GATCAACAGC
CTGCTCTGGA AGCGGCTGTT TCACAATAGT GATACATCGC AGTTATTATA TCTGGAGCAA
GAAGAGATTG TTCGTATCTT ATTGGTGCGT GATCTTAAAT CGGAGACCTC TATGGCATCG
CTGTTAATGC TAGATGTGGA CTTTCTAAAA ATACTGCTTG CTAACCTAGA TGATGCGCGA
GGTTGTTGGC AATCCGAAGG GCTTGAAAGC CGTATCTTGT CTGCGGATTC TTTACGGATT
AATCCTACTA AATCTACAGG GAGTTTTCTC TTTTGGTGGA TAGATGATGC AGGGCGAAGA
GTCCCGCTTG TTTTGGATAA AAGCTCTGAT CTACTATGTT TAATAGGGAT CAGCGAGTCA
GGAGTGGAGC ACAAGGTAGA GTTGACAGCA AACAACCTGA TAGATAGCTT GGAGACTAAA
AGGTTGATAC CGTCTACCTT TACTTGTTTC TTAGTATTGG CTTTTGCTCG AGGTGTAACT
TGCGCGGGTG GTTATTATCA AGCCGATTAT CTGCCAGTTA TTCAGCAGGG GCTCGTAAAG
TCTATCGAAG AGCATGGCAG TCATATGTCG TTGATCCCAT ATATTCAGGG AATACCTACG
GATAAATATT TGTCAGGTAT GCAGACAGTT ATGCGCAGAT GGGAGCATGG TGCCTTACAT
CCAGCTGGCC CATTAGAAAT GATAGCGTCA GAGATGTCGC TTAATGACCA TATCAGTAAC
ATTGTTGAGA TGACCGTACA TGACGCACAT AAAGCATCTT TGGTAGAAAC TGTCGCTGAT
GCAGCTCCAG ATCAAGTAAT GTCTGAGGAT TGGTATGCCC GGTTGGCAGA TCAACTAGGA
AGTTATTTTG CTGGCAACGT AGTAACTGTC TGA
 
Protein sequence
MNTLKTDDCS TEKDSLIDHY MAEIRKRLPV VDKTLELYGE LLLSEYLDVV TETASERYQS 
ADDLADVVYE YAAPLLGEKV AAMAREELKQ SPVVLTANHH GVDYFAQSVQ GTLLFSQRKL
PNGQKAKTVP VLACGAIPLN NMTYPRGMLC YDITEFKRAG IPIRLPLFPK RRQNETVSLT
GPFEKGAVER AEKSTRKMVG DHLISAATGK ALMSVLEDEY SSPRVLGLSS YSEQAVVINS
LLWKRLFHNS DTSQLLYLEQ EEIVRILLVR DLKSETSMAS LLMLDVDFLK ILLANLDDAR
GCWQSEGLES RILSADSLRI NPTKSTGSFL FWWIDDAGRR VPLVLDKSSD LLCLIGISES
GVEHKVELTA NNLIDSLETK RLIPSTFTCF LVLAFARGVT CAGGYYQADY LPVIQQGLVK
SIEEHGSHMS LIPYIQGIPT DKYLSGMQTV MRRWEHGALH PAGPLEMIAS EMSLNDHISN
IVEMTVHDAH KASLVETVAD AAPDQVMSED WYARLADQLG SYFAGNVVTV