Gene Ping_3303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3303 
Symbol 
ID4625753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4074208 
End bp4074963 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content40% 
IMG OID639798413 
Productthiol:disulfide interchange protein DsbC 
Protein accessionYP_944589 
Protein GI119946909 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00340297 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.257142 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACTA TTTTTTCAAA AACAGGGGTT ATTTGTGTCT TTTTATTAAG CAGTTTTGCA 
GCCGTCTCAG CGACGTCTGA ATCTCCCTCC TCGCTGGTGG TTGAGGAAAT AACGACTAAA
ATGGAAAGCC TTAAGATCCC CGTTAATGAG ATTAATAAGT CAGCAGTAGA GGGATTATAT
GAAGTGATCT CCAATGGTGA TATTTATTAT ATTAGTGAAG ATGCAACCCA TTTGTTGTAT
GGAAGTATTT ACGCTTTAGA CAATCAGATG GTCAATATTA CTGAGCAGAA AAAAGCACAA
TTAAGTCGCC AAAAAGTCGC TAAAAATATA GACAAAATAA CCGCCTTTGA AAAAGACATG
ATTGTGTTTA AAGCGCAGGA TGAGAAACAC GTTGTCACTG TTTTTACCGA TCCTACCTGC
AGTTACTGTC AGAAATTACA TTCACAAATG GCTGACTATA ATAAATTGGG TATTACTATT
CGCTATTTAG CATTTCCGCG AGCGGGTATT GATTCTTCAA CCTACCATAC TATGGTCTCA
ATATGGTGCT CAAACGATCC TAAAAATGCG ATGAATATGG CTAAAAAACG CCGTGAGATC
CCCTCTGAAA CCTGTGAAAA CACCGTCAAG GAGCAATATC AGCTTGGGCG TTTACTTGGG
GTTAATGGCA CACCGGCTTT GATTTTAGAA AATGGTACCC TCACCCCGGG TTATCTTCCT
CCTCAGCGTT TGCTGCAGTT GTTAGAGGAA AAATAA
 
Protein sequence
MATIFSKTGV ICVFLLSSFA AVSATSESPS SLVVEEITTK MESLKIPVNE INKSAVEGLY 
EVISNGDIYY ISEDATHLLY GSIYALDNQM VNITEQKKAQ LSRQKVAKNI DKITAFEKDM
IVFKAQDEKH VVTVFTDPTC SYCQKLHSQM ADYNKLGITI RYLAFPRAGI DSSTYHTMVS
IWCSNDPKNA MNMAKKRREI PSETCENTVK EQYQLGRLLG VNGTPALILE NGTLTPGYLP
PQRLLQLLEE K