| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3279 |
|---|
| Symbol | |
|---|
| ID | 4626312 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 4046503 |
|---|
| End bp | 4047240 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639798386 |
|---|
| Product | fumarate reductase iron-sulfur subunit |
|---|
| Protein accession | YP_944565 |
|---|
| Protein GI | 119946885 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
|---|
| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.705808 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCAT CAACTATTAC AATAGATGTA CTGAGATACC GCCCCGAAAT GGATGAAAAA
CCATTTACTC AATCTTTTGA AGTCCCCTAC AGCCCAGACT TATCTGTTTT GGAATCCCTG
CAATATATTA AAGATCATCT GGATAGCACG GTTAGTTTCC GCTGGTCTTG CCGTATGGCG
ATTTGTGGCA GCTGCGGAAT GATGGTAAAT GGCGTTCCTA AATTAGGCTG TAAAGTATTC
CTGCGTGATT ATTTTCCAAA GAAAGTCAGT TTAGCACCCT TGGCTAACTT CCCTATTGAA
CGCGATTTGG TGGTCGTCAT GGATGACTTT ATCGATAAAT TAGAGTCCGT TAAACCCTAT
CTTATACCTG AAAAAGAAAA AGATTTAGCC GAAGGCCCTC ATCGGCAAAC ACCTTTACAG
ATGGAAAAAT TTAAACAGTT TTCAATGTGC ATAAATTGCG GCTTATGTTA CGCCGCCTGC
CCGCAATATG CCTTAGACAA GAAGTTTACC GGCCCTGCGG CTCTTGCATT GCTAGCGCGA
TACAACCGCG ACAGTCGAGA TAATGGTGAA GCTGAGCGGA TGAAAATAGT CAATCAGGAA
GAAGGTGTTT GGGGTTGCAC TTTTGTTGGA TATTGCTCGG TAGTTTGCCC TAAAGATGTT
GATCCGGCTG CAGCCATTCA ACTGCTTAAA GTGGACAGCA GTAAAGATTA TTTAATTGGT
ATGTTTAAAC CAGATTAA
|
|---|
| Protein sequence | MNASTITIDV LRYRPEMDEK PFTQSFEVPY SPDLSVLESL QYIKDHLDST VSFRWSCRMA
ICGSCGMMVN GVPKLGCKVF LRDYFPKKVS LAPLANFPIE RDLVVVMDDF IDKLESVKPY
LIPEKEKDLA EGPHRQTPLQ MEKFKQFSMC INCGLCYAAC PQYALDKKFT GPAALALLAR
YNRDSRDNGE AERMKIVNQE EGVWGCTFVG YCSVVCPKDV DPAAAIQLLK VDSSKDYLIG
MFKPD
|
|---|
| |