Gene Ping_3270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3270 
Symbol 
ID4626303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4034733 
End bp4035254 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content36% 
IMG OID639798377 
Productlipoprotein signal peptidase 
Protein accessionYP_944556 
Protein GI119946876 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0597] Lipoprotein signal peptidase 
TIGRFAM ID[TIGR00077] lipoprotein signal peptidase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAA TAATAGAAAA ATCAGGTTTG CGCTGGTTAT GGCTCGCCGC AATCATGTTA 
GCGCTTGACC AAGTAACTAA GTATTGGACA ATACAATCAT TAGATTTATA TGAATCTTAT
GAGATTTTTT CATTCTTTAG CTTTACCTAC GCAAGAAATT ACGGTGCAGC GTTTAGCTTT
TTAGGTGATG CAGGAGGGTG GCAAAGATAT CTGTTTACGG CCATTGCAAT CGTCGTTTCA
AGTTATTTAG TTTACTTATT AAAGAAAAAT GCTTCGACAG ATCGTTGGAT TAACTGTGCT
TATGCATTGA TCTTATCGGG TGCGCTTGGC AATGTAGTCG ATCGTATGAT GTTTGGTTAT
GTCATCGATT TTTTAGATTT TGATTTAGGT TTTTATCGCT GGCCAACCTT TAATATTGCA
GATAGTGCTA TTTTTACGGG GGCTGTAATA ATGATTTTTG AGTCTTTTTT TGCCAAACAG
GCAAAACCAA TTAAACAACC AAAGGGAAAT AAAAATGTCT GA
 
Protein sequence
MAEIIEKSGL RWLWLAAIML ALDQVTKYWT IQSLDLYESY EIFSFFSFTY ARNYGAAFSF 
LGDAGGWQRY LFTAIAIVVS SYLVYLLKKN ASTDRWINCA YALILSGALG NVVDRMMFGY
VIDFLDFDLG FYRWPTFNIA DSAIFTGAVI MIFESFFAKQ AKPIKQPKGN KNV