Gene Ping_3247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3247 
Symbol 
ID4626317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4006057 
End bp4006962 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content47% 
IMG OID639798354 
Producttranscriptional regulator, substrate-binding of LysR family protein 
Protein accessionYP_944533 
Protein GI119946853 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGGT CAACCATCAC CCTTGAAGCC ATCACAGTAT TAGATGCAAT TGAAAAACGC 
GGCAGTTATG CCGCTGCGGC AGAGCAGCTT AATAAGGTTC CCTCGGCACT CTCCTATATA
GTGCAAAAAT TAGAAGATCA GCTGCAGGTC ACCATCTTCC AAAAACAGGG CAGGCGTTCA
GTACTCACCC CGGCGGGTAA AAACCTGCTT AACGAGGGAC GCGTGATCCT TGAAGCCGTT
GAGCGACTCA CCGTCAAAAC GCAAACCATC GCCAATGGCT GGGAGCCCAA GTTAAATATT
GCGATCGATT CTATTTTACA AACTACGGTT ATTTTTTCTG TGGTTAACGA TTTTTTAACG
GCCTGTCCAA ATGTGGAAAT GGACATCAGC GAAGAGATTT TAAACGGTGC CTGGGAGGCA
TTAGCGGAGG ATAAAATAGA TATGATTATC GGTGTTCCGG GGCCGGCTCC CAAACAGAAA
GGCATACAAA CGCTGCATCT CTGTGATTTT GAACCTGTTT TTGCCGTCAG TCCAACTCAC
CCCTTAGCCA AACAAGCGCA GCCCTTAAGC AATGCATTGA TTGCCGAGTA CCGTGCGGTG
GTTGCCCACG ATACGGCGCG CAACTGGATA GCGCAGACGC AATCGGTGAT CAGTGAAGAT
AAGTATTTTT ATGTGCCCAG TATGGACTAT AAAATCAGGG CGCAAATAGC GGGTATCGGT
TGCGGGTTTT TACCCCGTTG TCGTATTCAG GAATTTTTAC AAAACGGCCA GTTGCTTGAA
TTGCAGATAA CCCCCACCCG GCCTGCGGTT CCCTTATATT TAGCCTGGAA AGTGGTTAAT
CAGGGTAAAG CCTTAAAAAT GCTTCGTGAG ATGCTGATAG CCAATAAAGC ATTGATTAAA
TGTTAA
 
Protein sequence
MQRSTITLEA ITVLDAIEKR GSYAAAAEQL NKVPSALSYI VQKLEDQLQV TIFQKQGRRS 
VLTPAGKNLL NEGRVILEAV ERLTVKTQTI ANGWEPKLNI AIDSILQTTV IFSVVNDFLT
ACPNVEMDIS EEILNGAWEA LAEDKIDMII GVPGPAPKQK GIQTLHLCDF EPVFAVSPTH
PLAKQAQPLS NALIAEYRAV VAHDTARNWI AQTQSVISED KYFYVPSMDY KIRAQIAGIG
CGFLPRCRIQ EFLQNGQLLE LQITPTRPAV PLYLAWKVVN QGKALKMLRE MLIANKALIK
C