Gene Ping_3239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3239 
Symbol 
ID4626337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3995986 
End bp3996903 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content44% 
IMG OID639798346 
ProducttRNA delta(2)-isopentenylpyrophosphate transferase 
Protein accessionYP_944525 
Protein GI119946845 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase 
TIGRFAM ID[TIGR00174] tRNA isopentenyltransferase (miaA) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACT ATCCGACCGC CCTGTTTTTA ATGGGGCCTA CGGCTTCTGG AAAAACCGAT 
TTAGCCATAA AATTAGCCTT GCAATGTGAC TGTGAAATTA TCAGTGTTGA TTCCGCGTTA
ATTTATAAAG GAATGGATAT TGGTACGGCC AAACCAAGCA ATCACGAGCT GCAACAAGTG
CCGCATGCTT TGGTTGATAT TATTGACCCG CTTGAGTCCT ACTCTGCCGG TGATTTTCGT
GAAGATGCAT TAAGTTTAAT GCAGGAGATC ACCGATCGTG GTCATACTCC TTTATTAGTG
GGGGGGACTA TGCTGTATTA CAAAGCCTTA GTCGACGGAT TATCTCCGCT GCCCAGTGCC
AATCCAAAAG TACGTGCGCA AATAGAGAAA GAAGCGCTGG AAAATGGCTG GCAGGCTTTA
CATGATAAGC TTGAGCAGAT AGACCCCGTT TCAGCTGCAC GTATCCATGT GAATGATCCT
CAGCGTTTAG CGCGTGCCCT TGAGGTTTTC CGCATATCAG GCAAAAGCTT AACTGAACTG
ACAAAAGTGA AAAGTGATCC TATTCCCTAT AATATTAAAC AATTTGCCAT CGCACCCCTT
GAAAAAAGCG TCTTACATGC GCGTATCGAG CAACGTTTTG AACTAATGCT TGAATCCGGG
TTTGAGCAGG AAGTACGCAA ACTTTATCAA CGTGGTGATT TGCATTTAGA TTTACCCTCA
ATGCGCTGTG TTGGTTACCG GCAAATGTGG GAATATTTAC AAGGCACAAT GGATTATGAG
GAAATGCGCT TTCGTGGCAT TGTAGCAACG AGACAACTCG CTAAACGGCA AATGACCTGG
TTACGCGGCT GGCAAAATGT AACTTGGCTT GAAACAGGTC ATGCTGATAA TTTTGAACGC
ATCAAGGCGA TGTTATAA
 
Protein sequence
MNNYPTALFL MGPTASGKTD LAIKLALQCD CEIISVDSAL IYKGMDIGTA KPSNHELQQV 
PHALVDIIDP LESYSAGDFR EDALSLMQEI TDRGHTPLLV GGTMLYYKAL VDGLSPLPSA
NPKVRAQIEK EALENGWQAL HDKLEQIDPV SAARIHVNDP QRLARALEVF RISGKSLTEL
TKVKSDPIPY NIKQFAIAPL EKSVLHARIE QRFELMLESG FEQEVRKLYQ RGDLHLDLPS
MRCVGYRQMW EYLQGTMDYE EMRFRGIVAT RQLAKRQMTW LRGWQNVTWL ETGHADNFER
IKAML