Gene Ping_3238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3238 
Symbol 
ID4626336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3995349 
End bp3995582 
Gene Length234 bp 
Protein Length77 aa 
Translation table11 
GC content38% 
IMG OID639798345 
ProductRNA chaperone Hfq 
Protein accessionYP_944524 
Protein GI119946844 
COG category[R] General function prediction only 
COG ID[COG1923] Uncharacterized host factor I protein 
TIGRFAM ID[TIGR02383] RNA chaperone Hfq 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAG GACAGTCACT TCAAGACCCA TTTTTAAATG CGTTACGCAA AGAGCATATT 
CCAGTTGCAA TTTATTTAGT AAATGGCATC AAGTTACAGG GACAAATTGA GTCTTTTGAT
CAATTTGTTA TTCTGTTGAA AAATACGGTG AGTCAAATGG TCTACAAACA TGCTATTTCA
ACCGTTGTTC CTGCGCGGGC GATCGCGGCT ATTCCACATG TTGAAAGTGA TTAA
 
Protein sequence
MAKGQSLQDP FLNALRKEHI PVAIYLVNGI KLQGQIESFD QFVILLKNTV SQMVYKHAIS 
TVVPARAIAA IPHVESD