Gene Ping_3214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3214 
Symbol 
ID4624647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3969390 
End bp3970325 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content41% 
IMG OID639798321 
Productmethyltransferase of 50S ribosomal subunit protein L11 
Protein accessionYP_944500 
Protein GI119946820 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2264] Ribosomal protein L11 methylase 
TIGRFAM ID[TIGR00406] ribosomal protein L11 methyltransferase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.450631 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAGTC TCATTATTAT AACCATCTTA AAAAAGGAAA AAATCATGCC TTGGATACAA 
TTAAAGTTAA ATGCAACTGC CAAAAATGCA GAAAACATAG GTGAACTGTT AATGGAAAAT
GGTGCATTAT CGGTCACCTT TACCGATGCA CAGGATGTCC CTATTTTTGA GCCTGCACCA
GGTGAAACGC GTCTTTGGGG TAATACAGAT ATTACCGGTC TTTATGAAGC AGAAACGAAT
ATGTTACCCA TACTTGAGCA ATTACGTAAC AGTCCACTTT TAAGCAGTGA TTTTTCCCAC
AAAATTGAAG CGCTGGAGGA CAAAGACTGG GAACGTGAAT GGATGGATAA ATTCCACCCG
ATGAAATTTG GTCAACGTTT ATGGATCTGC CCAAGCTGGA AGCCCGTACC CGATGAAAAC
GCTATCAATG TCATGCTTGA TCCCGGGCTT GCATTTGGTA CAGGTACACA CCCCACCACC
GCTTTATGTT TGACCTGGTT AGACAGCCTG GATTTACAAG ATAAAGTGGT TATCGATTTT
GGTTGTGGCT CCGGAATTTT AGCCATTGCA GCCTTAAAAT TAGGTGCTAA AAGAGTGATT
GGTATTGATC TTGATCCCCA GGCAATTACG GCTAGCCGCG ATAATGCGCA ACGTAACAAT
GTGTCAGATC AACTTGAATT ATATTTACCA GCTGATTTAC CCGAAGGTAT TTTCGCCGAT
GTTTTAGTTG CGAATATTCT TGCAGGCCCG CTTCGTGAAC TATCAACAAA TATTGAATCC
TTAGTAAAAA GCAACGGATC ACTTGCATTA TCAGGTATTC TAGAGCAACA AGCAGATGAA
TTGATTGAAG TTTACGGACA GTGGTTCACC ATGGAGAAAG CAACGATTAA AGAAGAGTGG
GCAAGACTTT CTGGGATCAA AAATATCGCC AGCTAA
 
Protein sequence
MLSLIIITIL KKEKIMPWIQ LKLNATAKNA ENIGELLMEN GALSVTFTDA QDVPIFEPAP 
GETRLWGNTD ITGLYEAETN MLPILEQLRN SPLLSSDFSH KIEALEDKDW EREWMDKFHP
MKFGQRLWIC PSWKPVPDEN AINVMLDPGL AFGTGTHPTT ALCLTWLDSL DLQDKVVIDF
GCGSGILAIA ALKLGAKRVI GIDLDPQAIT ASRDNAQRNN VSDQLELYLP ADLPEGIFAD
VLVANILAGP LRELSTNIES LVKSNGSLAL SGILEQQADE LIEVYGQWFT MEKATIKEEW
ARLSGIKNIA S