| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3203 |
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| Symbol | |
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| ID | 4624812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 3956884 |
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| End bp | 3958629 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639798310 |
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| Product | ATP-dependent RNA helicase, DEAD box family protein |
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| Protein accession | YP_944489 |
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| Protein GI | 119946809 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.185856 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0248784 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGAGT CAACAAATAC CAATCAAGAA GTTACCTTAC CAAATTTTAC TGAATTAAAT
TTACCTGAAG CACTAACAAA AGTTGTTTCT GAATTAGGTT ATGAAACCCC CTCTCCAATT
CAAGCACAAT GTATTCCTCT GTTGTTAGAA GGAAAAGATG TTCTAGGTCT TGCACAAACA
GGAACAGGAA AAACGGCAGC ATTCGCTTTA CCTTTACTGG CCAATATTGA TATTAATCTA
AACCAACCAC AAGTATTAGC CCTTGCGCCA ACGCGTGAGT TAGCAATTCA GGTTGCAGAA
GCATTCCAAA CCTATGCGCG CCATTTACGC GGTTTCCATG TACTTCCTAT TTATGGCGGT
CAAAGTTACG ACATCCAATT CAAGCAGTTA AAACGTGGAC CTCAAGTTGT TGTCGGCACA
CCCGGTCGTA TAATGGACCA CCTAAAACGC AAAACACTGG ACTTATCAAA TATTAAAACA
TTAATACTTG ATGAAGCTGA CGAAATGTTA CGTATGGGTT TCATTGACGA CGTTGAAACG
ATCATGAAAG AGATGCCGGA TAAGCGCCAA ACCGCACTTT TTTCTGCAAC CATGCCAGAT
CAGATTAAAC GTATTACAAA ACGTTACATG AACAGCCCAA CTGAAGTTAA AATCCAAAGT
AAAACATCAA CTGTGGAAAA TATTGAACAG AAATGTTGGA TAGTGCGTGG CGTTAATAAA
CTTGATGCCC TAACACGTAT GCTTGAAACT GAAGAATATG ATGGTGTGAT CATCTTTGCC
CGTACTAAAA CAGCAACAGT TGAATTAGCC GAGCGCTTAG AAGCCCGCGG TTACCGAAGC
GCAGCATTAA ATGGTGATAT GAATCAGCAG GTACGTGAAC GTACTATTGC TCGTTTGAAA
TCAGGCGGTT TGGATATTTT AGTCGCAACA GACGTTGCTG CACGTGGTCT TGACGTAGAA
CGTTTAAGTT TAGTGGTCAA CTATGACATT CCAACGGATA CAGAATCTTA TGTTCACCGT
ATCGGACGAA CAGGCCGTGC GGGTCGTAAG GGTAAAGCAA TATTATTCGC AGCACCGCGT
GAACGTCGTT TATTAAAAGC GATTGAACGT GCAACCCGTC AAGAAATTAC TATCATGGAC
TTACCTAGCC GTGATGAAGT AACTAAAACG CGCATCGCTA ATTTTCAAAA ACAACTTTTA
TCTGTTGTTG AAAGTGAAGA TCTTACTTTC TACCGTACTT TATTCGAAGA AATCGAAAAC
AATACGGATA TTGATCATTT AGATCTTTCT GCGGCCCTTC TTTATCTGGC ACAGAAAGAA
AAACCTTTAC AGCCAGTTGA AGAAAAATTT GTCGAGCCAC GCCCAAATAC TAGTAATCCT
CGCGAGGAAC GTGGACGTCG CGATCGTAAT GACCGTAACG ACCGTGGACG TACTGAGCGT
AGTGACCGTG GACGTCCTGA GCGCAGCGAA CAAGGAGGTG ATAAACCTCG TGGACGTGGA
CGCCCAACGG ATGTTGAATT AGAAGTATAT CGTATCGATG TAGGTCGTTC ACATGGTGTC
CAAGTTAAAA ATATTGTGGG TGCCATTGCT AATGAAGCTG ATATCAATAG CCGTTTTATT
GGTGATATCA AACTTTCAGA TGATTATTCA ACCATTGAAT TACCAAAAGG TATGCCGGCT
GAAACACTTA AACATCTTGA AAATGTTTAT GTTTGTAAAC GTCAGTTGAA TATCAAAAAG
AACTAA
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| Protein sequence | MSESTNTNQE VTLPNFTELN LPEALTKVVS ELGYETPSPI QAQCIPLLLE GKDVLGLAQT
GTGKTAAFAL PLLANIDINL NQPQVLALAP TRELAIQVAE AFQTYARHLR GFHVLPIYGG
QSYDIQFKQL KRGPQVVVGT PGRIMDHLKR KTLDLSNIKT LILDEADEML RMGFIDDVET
IMKEMPDKRQ TALFSATMPD QIKRITKRYM NSPTEVKIQS KTSTVENIEQ KCWIVRGVNK
LDALTRMLET EEYDGVIIFA RTKTATVELA ERLEARGYRS AALNGDMNQQ VRERTIARLK
SGGLDILVAT DVAARGLDVE RLSLVVNYDI PTDTESYVHR IGRTGRAGRK GKAILFAAPR
ERRLLKAIER ATRQEITIMD LPSRDEVTKT RIANFQKQLL SVVESEDLTF YRTLFEEIEN
NTDIDHLDLS AALLYLAQKE KPLQPVEEKF VEPRPNTSNP REERGRRDRN DRNDRGRTER
SDRGRPERSE QGGDKPRGRG RPTDVELEVY RIDVGRSHGV QVKNIVGAIA NEADINSRFI
GDIKLSDDYS TIELPKGMPA ETLKHLENVY VCKRQLNIKK N
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