| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3201 |
|---|
| Symbol | |
|---|
| ID | 4624810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 3954862 |
|---|
| End bp | 3955542 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639798308 |
|---|
| Product | amidophosphoribosyltransferase |
|---|
| Protein accession | YP_944487 |
|---|
| Protein GI | 119946807 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
|---|
| TIGRFAM ID | [TIGR00201] comF family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.387541 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0162666 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGAAT TGTCAAGCCA TGACAAGCTG ATCTGTCAAT ATTGCCAAAC AGCATTACTC
GAAGCGAGAA CCTGCTGTTT ACGCTGCGGC TTAGCGTTGA ATATCTCTTT ACCCTTTTGC
GGAGATTGTT TGAAAAAAGC ACACTTATTT GAACAATTAC ATGCCCTTGG AAGTTATCAA
CCGCCCTATT CACAGATGGT TAAAAAATTA AAATATACAA AACAGTTGCT TTACGGAGAG
CTATTGGGCG AATTACTCAC GGAATCGATT CTGCTTAATT TATCCGCGCA GCAGATAAGT
ACAGTTGATT ACTTATTACC CGTGCCATTA CACACAAAAA AACAGCGTTC CCGTGGTTTT
AATCAAGCAA CTATCATAGC GCAGGTGATC GCAAAACGAT TAAATACTCC CCTTTTATTA
GAAGGGGTCG AGCGCCATAT AAGCACAATG CCGCAGGAAG GGCTTACATT ATATAACAGA
AAGAAAAATT TAAATGGCGC TTTTTCTATC TGCCCATCAA TGCAGCAAGA GATAATAGGT
GCTTATATTG TCATTATCGA TGATGTTGTC ACCACTGGCG CAACAGTAAA TAGTTTGTGT
CACACACTAT TAGAAGCAGG GGCACAACGA ATCGATATTT GGTGCATCAG CAGAACATCA
TTGAACACTC AAAAATCATA A
|
|---|
| Protein sequence | MCELSSHDKL ICQYCQTALL EARTCCLRCG LALNISLPFC GDCLKKAHLF EQLHALGSYQ
PPYSQMVKKL KYTKQLLYGE LLGELLTESI LLNLSAQQIS TVDYLLPVPL HTKKQRSRGF
NQATIIAQVI AKRLNTPLLL EGVERHISTM PQEGLTLYNR KKNLNGAFSI CPSMQQEIIG
AYIVIIDDVV TTGATVNSLC HTLLEAGAQR IDIWCISRTS LNTQKS
|
|---|
| |