Gene Ping_3190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3190 
Symbol 
ID4624795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3939600 
End bp3939926 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content40% 
IMG OID639798294 
Productthioredoxin 
Protein accessionYP_944477 
Protein GI119946797 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.425401 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00537167 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGAAA ATATCGTAAC GTTAAGTGAT GCAAGTTTTG AAGATGATGT AGTTAATGCC 
GAAGGTCCTG TTTTAGTTGA TTTTTGGGCT GAATGGTGTG GACCTTGTAA AATGATCGCT
CCTATTCTTC AGGAAGTTGC GGCTGAATAC GCAGGTAAAG TCACTATTGG TAAATTAAAT
ATAGACGAAA ACAGTGCGAC CCCGCCTAAA TTTGGTATTC GTGGCATTCC AACGCTGTTG
TTATTTAAAG ACGGTAAAGT TGCTGCAACG AAAGTTGGGG CGCTTTCCAA AACCCAACTT
GTAGAATTTT TGGATGCAAA TATCTAA
 
Protein sequence
MSENIVTLSD ASFEDDVVNA EGPVLVDFWA EWCGPCKMIA PILQEVAAEY AGKVTIGKLN 
IDENSATPPK FGIRGIPTLL LFKDGKVAAT KVGALSKTQL VEFLDANI