Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3188 |
Symbol | |
ID | 4624793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 3936607 |
End bp | 3938076 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639798292 |
Product | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase |
Protein accession | YP_944475 |
Protein GI | 119946795 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.127364 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00754697 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAATTTG ATGATTTACG TGACTTTATC GGGCAGCTCG AGGAGCGGGG ACTTTTAAAA CGTATCAAAC AAGAGATAGA TCCTCACTTA GAAATGACGG AAATCTCAGA TCGTACTTTA CGTGCAGGTG GGCCCGCTCT TTTATTTGAG AATCCAAAAG GTTTTGATAC GCCCGTTCTG ACTAACTTAT TTGGTACAAC TCAGCGTGTG GCATTGGCGA TGGGTCAGGA TGACGTTGCA GCTTTAAAAG AGGTCGGCAA GTGGTTGGCT TATTTAAAAG AGCCTGAGCC ACCCAAAGGC ATTAAATCAT TATGGGAAAA ACTGCCAATA TTTAAGCAAG TATTAAATAT GCCGACCAAA AAAGTGCGCT CACCGGCTTG CCAGCAGGTA ATTATGGAAG GTGATGACGT TGATTTAACC AAACTGCCTA TTATGACTTG TTGGCCGGGA GATGTTGCTC CTTTGATTAC CTGGGGTTTA ACCATTACTA AAGGTCCCTA TAAAAAGCGT CAAAATTTAG GAATTTATCG CCAGCAGTTG TTAGGGAAAA ATAAGATAAT AATGCGCTGG TTATCGCATC GCGGCGGGGC GCTTGACTTT CGAGAGTGGC AAGAAGTTAA TCCGGGTAAA CCTTTTCCTG TTTCGGTGGC CTTGGGTGCT GATCCGGCCA CTATTTTAGG GGCGGTAACC CCGATCCCTG ATACTTTGTC AGAATATGCC TTTGCGGGTT TATTACGTGG CTCGCGCACT AAAGTAGCAA AAAGCATAAG TAATGATCTT GATATTCCAG CTACTGCCGA AATAATATTA GAAGGTTATC TGCAGCCTGG AGAGGAAGCA CCAGAGGGCC CTTACGGTGA CCATACGGGT TATTATAATG AAGTTGACGA TTTTCAAGTA ATGACAGTGA CCCATGTAAC GCATCGCGAA AATCCTATTT ACCTCAGCAC TTATACTGGA CGTCCGCCCG ATGAACCTTC AATTTTAGGT GTCGCGCTTA ATGAAATCTT TGTCCCTATT TTACAAAAGC AGTTTCCCGA AATTGTCGAT TTTTATCTGC CACCGGAGGG CTGTTCATAC CGTATGGCGG TTGTTTCCAT TAAAAAAAGT TATCCGGGTC ATGCCAAGCG AGTGATGTTC GGCATTTGGT CTTTCCTACG TCAATTTATG TACACCAAGT TTATTATTGT TTGTGATGAT GATGTCAATG TGCGTGACTG GAATGATGTG ATTTGGGCGA TTACAACCCG TATGGATCCA TCTCGAGATA CCACTTTGGT CGATAATACA CCTATTGACT ACTTGGACTT TGCTTCTCCC GTTTCAGGCT TAGGCTCAAA AATGGGCATG GATGCGACCA ATAAATGGGC TGGAGAGTCG GATCGGGAAT GGGGGACACC TATTTTAATG GATAAAAAAG TAAAAGAAAA AATAGATGAT CTTTGGCAAG ACTTAGATAT CCTGTCATAA
|
Protein sequence | MKFDDLRDFI GQLEERGLLK RIKQEIDPHL EMTEISDRTL RAGGPALLFE NPKGFDTPVL TNLFGTTQRV ALAMGQDDVA ALKEVGKWLA YLKEPEPPKG IKSLWEKLPI FKQVLNMPTK KVRSPACQQV IMEGDDVDLT KLPIMTCWPG DVAPLITWGL TITKGPYKKR QNLGIYRQQL LGKNKIIMRW LSHRGGALDF REWQEVNPGK PFPVSVALGA DPATILGAVT PIPDTLSEYA FAGLLRGSRT KVAKSISNDL DIPATAEIIL EGYLQPGEEA PEGPYGDHTG YYNEVDDFQV MTVTHVTHRE NPIYLSTYTG RPPDEPSILG VALNEIFVPI LQKQFPEIVD FYLPPEGCSY RMAVVSIKKS YPGHAKRVMF GIWSFLRQFM YTKFIIVCDD DVNVRDWNDV IWAITTRMDP SRDTTLVDNT PIDYLDFASP VSGLGSKMGM DATNKWAGES DREWGTPILM DKKVKEKIDD LWQDLDILS
|
| |