Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3185 |
Symbol | |
ID | 4624790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 3931322 |
End bp | 3934138 |
Gene Length | 2817 bp |
Protein Length | 938 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639798289 |
Product | fused DNA polymerase 5'->3' exonuclease and 3'->5' polymerase and 3'->5' exonuclease |
Protein accession | YP_944472 |
Protein GI | 119946792 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
TIGRFAM ID | [TIGR00593] DNA polymerase I [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.994376 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.149667 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACTA TTCCGGAAAA TCCTTTTATC CTTGTTGATG GTTCTTCATA TCTTTATCGC GCTTTTTTTT CACCTCCACA TTTGACCAAC TCTGCAGGTG AAGCAACGGG GGCTGTTTAT GGTGTGGTTA ATATGCTGCA AAGTTTATTA AAACAATTTA ATCCCAGTCA TGTGGTGGTG GTTTTTGATG CAAAGGGTAA AACCTTCCGT GATGATATGT ACACTGAGTA TAAATCTAAC CGACCCAGTA TGCCCGATGA TTTACGCATT CAAATTGAGC CGTTACATGC CGTTATTAAG GCGATGGGCT TGCCTATTTT AACCATCCCG GGTGTTGAGG CTGATGATGT TATTGGCACA CTTTCCCGCC AAGCAAGTGC GCAGGGGATC ACGACCTTAA TCAGCACTGG TGATAAAGAT ATGGCGCAAC TGGTTGATAC AAATACGCTA TTAATCAATA CTATGACAAA TACCGTTCTT GATGTAGAAG GTGTTAATGA AAAATTTGGA ATTCCACCCG AGTTGATTAT CGATTATCTT GGTTTAATGG GAGACAAAGT CGATAATATT CCGGGAGTAC CAGGTGTTGG AGAAAAAACG GCTCTGGCTA TGTTACAGGG GCTGGGCTCG ATGGATGATA TTTACCTAAA CCTCGACAAA CTCGCTGCCC TGGGCTTTCG TGGCAGTAAA ACTATCGCTA AAAAGATGCA GGACAATGAA GAGATGGCAA GGCTTTCTTA TCAACTTGCC ACTATTAAAA CCGATGTTGA ATTATCTGAA AGTTATGAAG ACTTTAAGCC TAAAGCCCAA GATACCGATG CGTTGATTAA ACTTTTCGGA CAATTGGAGT TTAGACGCTG GTTATCTGCC CTGTTAGACA ATGGCAGTAT GACAAACCAC CAAGGTGCAG TTTCCAGTAC TGCGACTAGC TCTACTAGCA CTGCCACTGC TAACCCTAGT GCGACAACCT CCAGTATTGA TCGCAGCGGC TACAAAACTA TTTATACGCA GGGGCAATTA ACACAGTGGA TTGCCAAATT AGAAGCCGCT GAGTTATTTT CCTTTGATAC AGAAACAACC AGCCTGGATT ACATGCAGGC CAGAATAGTG GGCCTCTCTT TTGCTGTCCA AAGCAATGTT GGCAGTGACG AGCAGCCTAT TATAGAAGCG GCTTATTTAC CCCTGGCCCA TGATTATATT GATGCGCCCA AGCAATTAGA TTTAACCACC ACCTTAGAAA AACTTAGACC TTTACTAGAA AGTGAAAAAT ATAAAAAAGT CGGCCAAAAT TTAAAATATG ACCGGAGTGT ATTGCTCAAT CACGGTATTG AATTAAAAGG TATCAAGTTT GATACTATGC TTGAATCCTA TGTCCTTGAT AGCACCGGGC GACATGATAT GGATACGCTG GCGCTTAAAT ATCTTGGTCA TCAATGTATT TCATTTGAAG AGATTGCAGG GAAAGGTAAA AAGCAGCTTC CCTTTAATCA AATCAGTATT ATAGAAGCTG CGCCCTATGC AGCCGAAGAT GCCGATGTCA CCCTGCGTTT ACATTTACAG TTATTTGAAC AATTGTCAGC TGAGCCTAAG TTGTTATCTG TTTTTAACAA TATTGAATTA CCTTTATTGA CCGTTCTTTC CGATATCGAA CGTGGTGGTG TTGAGATTGA TAGCGACTTA TTGACTAAAC AGAGTGCTGA AATCGGTAAA CGCTTATTGG AGCTCGAAGC CTTAGCTTAT GAAGAGGCAG GTAAACCCTT TAATCTTAGT TCACCAAAAC AGCTGCAGAC CATTCTTTAT GATGAGCTTG AGTTACCGGT TTTAAAGAAA ACGCCCAAAG GCGCGCCATC AACAGCCGAA GAGGTCTTAC AAGAATTGGC ATTAACTTAT CCCTTGCCCA AATTAATTAT TGAGCATCGT GGTTTAAGTA AATTAAAATC GACCTATACC GATAAACTGC CAAAAATGGT GAATGAAAAA ACCGGCCGTT TACATACCTC ATATCAGCAA GCCGTCACTG TCACCGGGCG CTTATCTTCA ACGGATCCAA ACCTGCAAAA TATTCCCATT CGTAGCGCCG AAGGACGCCG TATCCGTCAA GCTTTTATCG CTCAACCGGG CTATAAAATT GTGGCAGCCG ATTACAGCCA AATTGAATTG CGTATTATGG CCCATCTTTC ACAGGACAAA GGACTACTGG ACGCCTTTTC AACGGGCAAA GATATTCATA AAGCAACCGC TTCTGAAGTG TTTTCGGTGC CTTTGGATGA GGTCACCACG GAGCAAAGGC GCAGCGCTAA AGCGATTAAC TTTGGTCTTA TTTATGGCAT GAGTGCATTT GGCTTGGCTA AACAGCTCAA TATTGGTCGT CATGAAGCAC AGTTATACAT GGATAAGTAC TTCAACCGTT ATCCGGGTGT GCTTATCTAT ATGGAAGATA CGCGCAGCCT CGCCAATGAA AAAGCGTATG TTGAAACGAT TTTAGGTCGC CGTCTGCAAT TGCCCAATAT TAAATCCCGC AATGGAATGC TTAAAAAAGC CGCGGAGCGT GCCGCGATCA ATGCGCCAAT GCAGGGGACT GCTGCCGATA TCATTAAAAA AGCGATGATT GATATGGCAG ATTGGATTGC ACAAAAGAGT CCAGGCAGCG TACAGATGTT AATGCAGGTA CACGATGAAT TGGTCTTTAG CATTAAAGAA GAGTTAGTTG AGTCCTACAC TAAAGAGATT CAAGCTATTA TGGCGAAAGC CGCTGATTTA GATGTGCCAC TGATTGCCGA TGCGGGTGTG GGTGATAATT GGGACGAGGC GCATTAA
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Protein sequence | MATIPENPFI LVDGSSYLYR AFFSPPHLTN SAGEATGAVY GVVNMLQSLL KQFNPSHVVV VFDAKGKTFR DDMYTEYKSN RPSMPDDLRI QIEPLHAVIK AMGLPILTIP GVEADDVIGT LSRQASAQGI TTLISTGDKD MAQLVDTNTL LINTMTNTVL DVEGVNEKFG IPPELIIDYL GLMGDKVDNI PGVPGVGEKT ALAMLQGLGS MDDIYLNLDK LAALGFRGSK TIAKKMQDNE EMARLSYQLA TIKTDVELSE SYEDFKPKAQ DTDALIKLFG QLEFRRWLSA LLDNGSMTNH QGAVSSTATS STSTATANPS ATTSSIDRSG YKTIYTQGQL TQWIAKLEAA ELFSFDTETT SLDYMQARIV GLSFAVQSNV GSDEQPIIEA AYLPLAHDYI DAPKQLDLTT TLEKLRPLLE SEKYKKVGQN LKYDRSVLLN HGIELKGIKF DTMLESYVLD STGRHDMDTL ALKYLGHQCI SFEEIAGKGK KQLPFNQISI IEAAPYAAED ADVTLRLHLQ LFEQLSAEPK LLSVFNNIEL PLLTVLSDIE RGGVEIDSDL LTKQSAEIGK RLLELEALAY EEAGKPFNLS SPKQLQTILY DELELPVLKK TPKGAPSTAE EVLQELALTY PLPKLIIEHR GLSKLKSTYT DKLPKMVNEK TGRLHTSYQQ AVTVTGRLSS TDPNLQNIPI RSAEGRRIRQ AFIAQPGYKI VAADYSQIEL RIMAHLSQDK GLLDAFSTGK DIHKATASEV FSVPLDEVTT EQRRSAKAIN FGLIYGMSAF GLAKQLNIGR HEAQLYMDKY FNRYPGVLIY MEDTRSLANE KAYVETILGR RLQLPNIKSR NGMLKKAAER AAINAPMQGT AADIIKKAMI DMADWIAQKS PGSVQMLMQV HDELVFSIKE ELVESYTKEI QAIMAKAADL DVPLIADAGV GDNWDEAH
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