Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3171 |
Symbol | |
ID | 4624717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 3903492 |
End bp | 3904292 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639798275 |
Product | ABC sugar (glycerol) transporter binding protein inner membrane protein |
Protein accession | YP_944458 |
Protein GI | 119946778 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.550599 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAGA AGAAAACACT GGGGCTTAGC GTATATATTA TATTCTTGCT ATTGCCTATC TACTGGCTGT TAATGATGTC GTTTAAGGAT AATTCAGAGA TATTAGGTGG CTTAAGTTTT TGGCCTGATA CTTTCACCTT TGACAACTAC ATGACTATCT TTACCGATCC TACATGGTAT ACGGGTTACC TTAACTCTAT CTATTATGTA GCACTGAATA TGATTATTAC GTTAACGGTG GCATTACCTG CGGCCTATGC CTTTTCACGT TATAACTTTA TGGGCGACAA GCATCTGTTT TTCTGGTTAT TGACCAACAG AATGTCACCA CCTGCGGTAT TTTTGCTGCC GTTTTTCCAG CTATATTCAT CGGTGGGATT GTTTGATACT CACATCGGTG TCGCCCTCGC GCACTGTTTG TTTAATGTGC CCTTAGCGGT CTGGATTCTG GAAGGTTTTA TGTCCGGTGT GCCGCGTGAG ATTGACGAAA CTGCCTATAT CGACGGTTAC ACTTTTCCTA AGTTTTTTGT GAAGATATTT CTTCCCTTAA TTCGCTCCGG AATCGGTGTA ACAGCCTTCT TTATCTTTAT GTTCAGTTGG GTGGAATTAT TGTTAGCAAG AACATTGACA TCAGTTGACG CTAAACCTAT TGCAGCGGTA ATGACCCGTA CGGTCAGTGC ATCGGGTATT GACTGGGGAG TCTTAGCAGC GGCGGGTGTA CTGACTATTC TACCTGGCGT AGTGGTTATT TGGTTTGTTA GAAATCACGT GGCGAAGGGC TTTGCTCTTG GCCGTGTATA G
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Protein sequence | MNKKKTLGLS VYIIFLLLPI YWLLMMSFKD NSEILGGLSF WPDTFTFDNY MTIFTDPTWY TGYLNSIYYV ALNMIITLTV ALPAAYAFSR YNFMGDKHLF FWLLTNRMSP PAVFLLPFFQ LYSSVGLFDT HIGVALAHCL FNVPLAVWIL EGFMSGVPRE IDETAYIDGY TFPKFFVKIF LPLIRSGIGV TAFFIFMFSW VELLLARTLT SVDAKPIAAV MTRTVSASGI DWGVLAAAGV LTILPGVVVI WFVRNHVAKG FALGRV
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