Gene Ping_3116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3116 
Symbol 
ID4625908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3836705 
End bp3837487 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content43% 
IMG OID639798229 
Productpeptidylprolyl isomerase, FKBP-type 
Protein accessionYP_944412 
Protein GI119946732 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.142548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATG TATTTAAAGT TTCGTTATTA GCCGCTGCGG TAGCATTTAC TGTAGGGTGT 
GAAGACAAAC CAGAGCCCGT CGCTCAAGAA AAAGTACAAG AAGAAGTTGT AGAAAAAGTA
GCTTTCGAAA ATGATGCTGA GAAAGCTGCC TATGCAATTG GTGCCTCATT TTCAACACAG
ATTAAAGCGG GTGTTGCTAA ACAAGCTGAA TTCGGATTAG AGACCCTTGA TACAGAAGCT
ATTATTGCCG GTGTTACTGA TTCGCTACGT GGTAATTCTA AGTTAACCGA GGAAGAGGTG
GTTGCAACCG TCAATGCTTA TGGTAAACAA GTACAAGCTG CCGCAGAAAC TAAAATGAAA
GAAGAAGGCG AAAAGATGGC TGCACAAGCA GCACTATTTT TAACTGAAAA TGCCAAGGCC
GAGGGTGTTA CCGTGACTGA CTCTGGTTTA CAGTACTCAG TAATGACTGC AGCAGAAGGG
CCTAAACCTC AAGCTGAAGA TACAGTAACA GTACATTATG TAGGAACCTT GGTTGACGGA
ACTGAATTTG ATAGCTCAAT CAGTCGTGGT GAACCTGCTA AGTTCCCGCT TAACCGCGTT
ATTCCTGGTT GGACGGAAGG TGTGCAGTTG ATGAGTGTTG GCGAAAAATA CAAGTTTGTT
ATCCCAGCTG AATTAGCTTA CGGAGAGCAA GGTGCAGGTT CAATTCCTCC TGGTGCAACT
CTGATTTTTG AAGTTGAATT ATTAGATCTC GAAGCTCCTA AAGCCGCGGT TTCTCCAGAA
TAA
 
Protein sequence
MKNVFKVSLL AAAVAFTVGC EDKPEPVAQE KVQEEVVEKV AFENDAEKAA YAIGASFSTQ 
IKAGVAKQAE FGLETLDTEA IIAGVTDSLR GNSKLTEEEV VATVNAYGKQ VQAAAETKMK
EEGEKMAAQA ALFLTENAKA EGVTVTDSGL QYSVMTAAEG PKPQAEDTVT VHYVGTLVDG
TEFDSSISRG EPAKFPLNRV IPGWTEGVQL MSVGEKYKFV IPAELAYGEQ GAGSIPPGAT
LIFEVELLDL EAPKAAVSPE