| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3066 |
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| Symbol | |
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| ID | 4626096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 3763927 |
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| End bp | 3766356 |
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| Gene Length | 2430 bp |
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| Protein Length | 809 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639798182 |
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| Product | hypothetical protein |
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| Protein accession | YP_944365 |
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| Protein GI | 119946685 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00683748 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00952273 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | TTGTACAGGC TAGGCATTTA TTTAGTTAAT CTCAGTTTAA TCCTCCTTCT AATTAAACCA
GTAGAAGCTG CTAACGTACC TCCAGGTTTT GAGTCATTAC TTGATAGTCA GGAACTGGTT
GTCGATATTA TCTACCAAGA CACCTTTATC GGTACAGCTC AAGCCACCTC TTTATTAGGA
AAACTGACCT TAAAATCGCC CATTGCCGTT ACCAATTTAA TCTCTAATAT TAAAGACCTA
CAAATGGTGA TCAATGCGCT GAGTTCACCT CTACCCGATA ATGCTGCAAA ATCATGTCTG
CCGATAAAAA AGCCCGGTTG TGGAGAATTA GAACTGACAC TGGCTAACCC GGTTGGCTTT
ATATACACCT CTTCACGCTA TAAACTGCAA TTATTTATTC ATCCTTCGTT TTTAACAATA
GAAACGATGA CAGAAAAAGA GTACCTCCCT CTCCCTGAAT CGGGTTTTTC AATAATAAAT
AACTTAAACG GTGCTTATTC CTATAGTAAA AATGCATTTT CGGATGAAGA GGTAAACTCT
TCTGTTTCAC TCAGTTCCAT TGCTGCTTAT AACAACTCTC ATCTCGCTTT TGGCGCTTAT
CATTCTAGCG CTTCAAGAGG CTTCGTAGAA AAAACATTGT TTCAACACGA TCAGCCTGGT
TATTTTTATG GTGGTGGACT ATTTAGAACG GCAGGATCAA ACCTTACTGA TTCTACACTC
ATGTATGGCG CTAATATTGC AACTTCAAGA AGAACCGCTA TTCATAAAAA TAGAGAAAGA
GGCAGTAAAA TTATTCTGTT TTTGTCACAA TCATCACAAG TAGAAATATG GCGAGAGGAC
CACTTACTTA ATACAGCTTC CTACGAAGCT GGAAATCAAG AAATAGATAC CAGCAGTTTA
CCAAACGGCA CCTATCTCAT TAACTTAAAA ATCAGGGGAA CCAGTGGGGT TGTGCGTGAA
GAACAACAGC TTTTTATTAA AAGCATAAAC TTACCCCCCG TGGGAAAGCC CTTTTACAAG
GCAGAAATTG GTAGAGTGGC AAAAAAAGAT CTTGATAACT GGCTGCCTGA TGTATCTGAA
ACATACTGGC TCAACACTCG ATTCTTGAAC CATATCAATG ACCAGTATGC TGTTGGTGCT
GATCTCCTTT CCGTTGGTGA TTCTTTTTCA TTAGAACTAA ACGCCAGCAC ACTTTTCGCA
AACTCTACCC TTAAACTTGC ATTATTAGGC AGCAGTAAAG AAAATTTTGC ACAATCATTT
TCTGTTTTTA CTCATTTAGA CAACCTATTT TTTAATTTCA GCACAATCAA TACCCATATT
AGCGATCCTA ATGATGAAAT CCCCATTAGT TACCTTTCTA GAGGAAGCAC AACGACGTAC
TATTCGCAGC TGTCCTTGGT ACTGCCAAAA AATAGCATAT TGGCATTTAA TGGATCTTAT
ACGTTACATG ATATTGAAAT TGACCCGAGC TACCGTTATG GCGCCTCTTT AAGCCTGCCA
TTATTTCATT TATACGGCAG TAACGTCATG TTAACTACTA GTGCTAATAA AACCAACGAC
GACACGTTAT TTTTACTTGG TCTAAAGGTT AACTTTTCAG CAGAAAACCA ATCTTATCAA
GTCGCTACAG GATATAAAAA ACAACAGTCA ACACCCTCGG GAACCTATTC CTCTGGCTCA
GCCCAAGTCA ATTCTGATGA TATTTTAGGT GGGAAAGGGA CTCTAGATGC TGGCGCAGAA
CAAAAAGAAA ATGGATTACA ACGATTATTT TCTAATGCAA CAGTAAAAAA TCAATATGGA
AAATATTCGG CTGGGGGCGA ATGGGCCAAT GATAATGAGA ACAATTCGTC AAAAAGAACA
TATCTCAATT TTAATGCAGG ATTAATCTCA ACCACCCGAA ATATGGTAAT AGGGGGCGAG
TCTGGCAATA GCGCAGTAAT AGTCAATGTT GATGGCAATG TGAAGTCTGC GCGCTTTGAT
ATTAAGGTTA ATAATCAGCT TTATATGAGG GATCTGAAAG TAGGTGACTC TATTCCTGTC
TATTTGAGTT CGTACCGAGA AAGCCAGATA CAACTTGTTG CCAGTAATGC ACCATTTGCA
ATCTATGACT CAGGGCCCAG AAGTGTCATT GTATATCCAG GTAATGTACA AACCTTAACT
TGGAGTATCA CCAAAGTATT TACCATTTTT GGTAAAATCG TTAATGAGGA TGGATTACCA
ATAATAAACA GTAAAATTTT GGGTACAAGT GGTATTGCAA TGACAGATCA ATTTGGCTAT
TTCCAAGCTG AGATAACAGG TGAAACTGAA TTAACCATTA AAAATAGTGA TCTTTGTATT
ATTGATATAA AAAAAGAAGA TTTAATTAAT AATGACTTAG TTAATTTAAA AGAGATTACC
TGTCGAAAAA ACAGGTCTGA GCCAAAATAA
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| Protein sequence | MYRLGIYLVN LSLILLLIKP VEAANVPPGF ESLLDSQELV VDIIYQDTFI GTAQATSLLG
KLTLKSPIAV TNLISNIKDL QMVINALSSP LPDNAAKSCL PIKKPGCGEL ELTLANPVGF
IYTSSRYKLQ LFIHPSFLTI ETMTEKEYLP LPESGFSIIN NLNGAYSYSK NAFSDEEVNS
SVSLSSIAAY NNSHLAFGAY HSSASRGFVE KTLFQHDQPG YFYGGGLFRT AGSNLTDSTL
MYGANIATSR RTAIHKNRER GSKIILFLSQ SSQVEIWRED HLLNTASYEA GNQEIDTSSL
PNGTYLINLK IRGTSGVVRE EQQLFIKSIN LPPVGKPFYK AEIGRVAKKD LDNWLPDVSE
TYWLNTRFLN HINDQYAVGA DLLSVGDSFS LELNASTLFA NSTLKLALLG SSKENFAQSF
SVFTHLDNLF FNFSTINTHI SDPNDEIPIS YLSRGSTTTY YSQLSLVLPK NSILAFNGSY
TLHDIEIDPS YRYGASLSLP LFHLYGSNVM LTTSANKTND DTLFLLGLKV NFSAENQSYQ
VATGYKKQQS TPSGTYSSGS AQVNSDDILG GKGTLDAGAE QKENGLQRLF SNATVKNQYG
KYSAGGEWAN DNENNSSKRT YLNFNAGLIS TTRNMVIGGE SGNSAVIVNV DGNVKSARFD
IKVNNQLYMR DLKVGDSIPV YLSSYRESQI QLVASNAPFA IYDSGPRSVI VYPGNVQTLT
WSITKVFTIF GKIVNEDGLP IINSKILGTS GIAMTDQFGY FQAEITGETE LTIKNSDLCI
IDIKKEDLIN NDLVNLKEIT CRKNRSEPK
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