Gene Ping_3045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3045 
Symbol 
ID4626058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3743034 
End bp3743636 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content44% 
IMG OID639798163 
Productnon-canonical purine NTP pyrophosphatase, rdgB/HAM1 family protein 
Protein accessionYP_944346 
Protein GI119946666 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0127] Xanthosine triphosphate pyrophosphatase 
TIGRFAM ID[TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.949841 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.955793 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA AATGGGTACT CGCCACCGGC AATAAAGGTA AAGTACAAGA AATGAGCGAA 
CTGCTGAATA GCTTTTCGAT CGAAGTGCTG CCACAAAGTC AGTTTGAAGT ATCAGACGTT
GCAGAAACTG GCACAACCTT TGTCGAAAAT GCCATTATAA AAGCACGTCA TGCGGCTAAA
GTAACAGGGT TACCCGCCAT TGCCGATGAT TCCGGGTTAG AAGTCGATTT TTTAAATGGC
CAACCGGGCA TTCGTTCTGC GCGTTTCGCT GGCGAAAATG CCACTGACCA GGAAAACATT
GAACTTTTAT TAAGTAAATT AGAAGGCATC GGCACAGAGC AGCGCCGAGC GCGTTTCCAA
TGTGTATTGG TTTATTTACG CCATGAATTA GACCCCACAC CGATTATTTG TCAAGGGACT
TGGCAGGGTA TTATCACAGA ATCACAGCAG GGTGAAAACG GCTTTGGCTA CGATCCCGTA
TTTTGGGTTG AAAGTGAACA ATCAACGTCA GCACAATTAA GCAAACAACG TAAAGCTGAA
TTGAGTCACC GGGGTCAAGC CCTGGGAAAA TTAGTTGAAT TGCTTAAAAA GCAATTAGGT
TAA
 
Protein sequence
MKKKWVLATG NKGKVQEMSE LLNSFSIEVL PQSQFEVSDV AETGTTFVEN AIIKARHAAK 
VTGLPAIADD SGLEVDFLNG QPGIRSARFA GENATDQENI ELLLSKLEGI GTEQRRARFQ
CVLVYLRHEL DPTPIICQGT WQGIITESQQ GENGFGYDPV FWVESEQSTS AQLSKQRKAE
LSHRGQALGK LVELLKKQLG