Gene Ping_3029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3029 
Symbol 
ID4625115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3726839 
End bp3727489 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content42% 
IMG OID639798147 
Productlipoate-protein ligase B 
Protein accessionYP_944330 
Protein GI119946650 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0321] Lipoate-protein ligase B 
TIGRFAM ID[TIGR00214] lipoate-protein ligase B 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.572663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAT TGGATACACA GCTTAAATTA CGTTACTTAG GTAGACAAGA TTACCTAACC 
TCGTGGCAGG CAATGAGCGA CTTCACTAAT CAACGTGATG AAAATACCAT CGATGAAATA
TGGTTAGTCG AGCACCCTGC GGTGTTTACC CAAGGGCTTG CGGGCAAAGC TGAACACCTG
TTAAAGCACA GTGAAATCCC GATCGTGCAA AGCGATCGTG GTGGACAAAT CACTTTTCAT
GCACCCGGAC AGTTGGTGGT ATACTTACTG ATTAACCTTC GCCGCAAAGC GCTTAATGTA
CGCGCATTAG TCACGGTTAT GGAAGACAGC ATTATTAATT TATTAGCAGA TTATAATGTT
ATCGCAGTGG CTAAACCCGA TGCGCCAGGT GTCTATGTTA ATGGTAAAAA AATAGCATCA
CTGGGACTGA AGATTCGCAA AGGCTGTTCT TTCCACGGAT TGGCATTAAA TGTTGATATG
GATTTATCCC CTTTTTTGCA AATTAATCCC TGTGGTTACG CGGGACTGGA GATGACCCAA
TGTAAGGCTG AGGGGTTAAC GCTTTCAGTT GACGAACTCG CACCGTTATT GATTGAAAAA
ATGAATCAAC AATTAGACTA TTCACATATT GAGAGTTTTC ACCATGAGTA A
 
Protein sequence
MKTLDTQLKL RYLGRQDYLT SWQAMSDFTN QRDENTIDEI WLVEHPAVFT QGLAGKAEHL 
LKHSEIPIVQ SDRGGQITFH APGQLVVYLL INLRRKALNV RALVTVMEDS IINLLADYNV
IAVAKPDAPG VYVNGKKIAS LGLKIRKGCS FHGLALNVDM DLSPFLQINP CGYAGLEMTQ
CKAEGLTLSV DELAPLLIEK MNQQLDYSHI ESFHHE