Gene Ping_3007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3007 
Symbol 
ID4623791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3707522 
End bp3708541 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content42% 
IMG OID639798125 
ProductABC iron(III) transporter periplasmic binding protein 
Protein accessionYP_944308 
Protein GI119946628 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.050744 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.546259 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTATAA AAAAATTACT TACCTCTGCC GCCATTTTCT CAACCTTAAG TGTCAGCAGC 
TTTACCGCTT ATGCTGAAGA AGTAAATATT TACTCATTTC GTCAGCCTTT TCTGATCGAG
CCTATTATGG AAAAATTCAC TAAACAAACG GGCATTAAAG TAAATATATT ATTTGCCAAA
AGTGGTTTGA TTGAGCGTGT CAAACGTGAA GGGAAATTAT CGCCTGCGGA TCTCGTATTA
ACCTCAGATT TTAGCCGCTT AATGATGATC AATGATGAGC GTCTTACGCA ATCCGTTGAC
AGTAAAATAT TAACCGAAAA TATCCCCAGC CAGTATCGCG ATCCGCAACA GCATTGGTTT
GCATTAACAA CACGGGTACG CAATATTTAC TCTTCTGCTG AGCGGGTTGG GCCAACGCCG
AATATTACCT ATCAAGATTT AGCCAGCCCG GAGTTTAAAG GTAAAGTATG TATGCGTGCA
GGCAAGCATC CTTACAATGT ATCACTGCTT GCTTCTGTGA TTGCTCATGA AGGTAAGGCA
AATGCAAAAA CCTGGCTTGA AGGCCTAAAA GCGAATCTTG CGCGTAAACC CCAGGGTAAT
GATCGTGCTC AAGTGAAAGC GATTAAAGAT GGCCTCTGTG ATTATGCCTT AGGTAACAGT
TATTATCTGG GTAAGATGCT TGCCGATCCG CAACAGTTAA GTTGGGCTGA AGCGGTCAAT
ATTAACTTCC CGAATCAGAC AACAACCGGT TCACATATTA ATGTCAGTGG TGTGGTATTG
ACTAAGTATG CACCTAATAA AGCAAGCGCC ATTAAACTGA TGGAATTTTT ATCAGGTGAA
ACTGCCCAAC AGATTTACGC AGAAGCTAAT TACGAGTATC CTGTAAATGC AAACGTGGCT
CCTTCTGAAT TAGTCGGATC ATGGGGCGAA TTCAAAGCAG ATTCCATTTC GCTTTCTGAT
ATTGCCAAGC AGCATCGAAC AGCCGTTAAG TTACTGGATG AAGTGAAATT TGATCTCTAG
 
Protein sequence
MFIKKLLTSA AIFSTLSVSS FTAYAEEVNI YSFRQPFLIE PIMEKFTKQT GIKVNILFAK 
SGLIERVKRE GKLSPADLVL TSDFSRLMMI NDERLTQSVD SKILTENIPS QYRDPQQHWF
ALTTRVRNIY SSAERVGPTP NITYQDLASP EFKGKVCMRA GKHPYNVSLL ASVIAHEGKA
NAKTWLEGLK ANLARKPQGN DRAQVKAIKD GLCDYALGNS YYLGKMLADP QQLSWAEAVN
INFPNQTTTG SHINVSGVVL TKYAPNKASA IKLMEFLSGE TAQQIYAEAN YEYPVNANVA
PSELVGSWGE FKADSISLSD IAKQHRTAVK LLDEVKFDL