Gene Ping_2962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2962 
Symbol 
ID4623478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3654504 
End bp3655118 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content44% 
IMG OID639798080 
Productribonuclease H 
Protein accessionYP_944263 
Protein GI119946583 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.118797 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAT TGAAAATTGA CTTTCCAGCT GTTGTGTATC CCGATTTTAC TTTGATTGCC 
GGTGTTGATG AGGTGGGTCG AGGTCCCTTA GTCGGCGATG TGGTGACCGC CTGTGTTATT
CTGGATGCCA ATAATCCTAT ATCGGGTTTA GCCGATTCTA AAAAACTTAG TGAAAAGAAA
CTGGCACTGT TGTTTGATGA GATCCAGGAA AAAGCCTTGT TTGTTGCCGT GGGCCGCGCC
TCTCCTGTGG AAATAGATGC GCTTAATATT TTGCATGCGA CTATGCTTGC GATGCAGCGT
GCGGTTGATA ATCTAAGCAT TTCCCCGGAA TTTGTCTTTA TTGACGGCAA CCGTTGTCCT
CAATTGAGCA TGCCCTGTGA AAGTGTTGTG AAGGGCGATG CGCGTGTTGC CGAAATAAGT
GCCGCATCTA TTATTGCGAA GGTCACCCGA GATCGGGAAA TGTGTGAACT AGATAAACAA
TATCCACACT ATGGATTTGC TAAGCATAAA GGCTATCCTA CCAAAGCGCA TTTTGCAGCA
ATTGAAAAAC ACGGTGTTAC CCCTGAATAT CGTAAAAGTT TTAAACCCGT TAAAAAAGTA
CTGGGTTTGT TATAA
 
Protein sequence
MSKLKIDFPA VVYPDFTLIA GVDEVGRGPL VGDVVTACVI LDANNPISGL ADSKKLSEKK 
LALLFDEIQE KALFVAVGRA SPVEIDALNI LHATMLAMQR AVDNLSISPE FVFIDGNRCP
QLSMPCESVV KGDARVAEIS AASIIAKVTR DREMCELDKQ YPHYGFAKHK GYPTKAHFAA
IEKHGVTPEY RKSFKPVKKV LGLL