| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2956 |
|---|
| Symbol | |
|---|
| ID | 4623472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 3643447 |
|---|
| End bp | 3645411 |
|---|
| Gene Length | 1965 bp |
|---|
| Protein Length | 654 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639798074 |
|---|
| Product | sodium/hydrogen exchanger |
|---|
| Protein accession | YP_944257 |
|---|
| Protein GI | 119946577 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0475] Kef-type K+ transport systems, membrane components
[COG0569] K+ transport systems, NAD-binding component |
|---|
| TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.356807 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.100111 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTTAATG ATCTGTTATT ATTACTCTTT TTTGCAATTG TCAGCGTACT TATCTTTAAA
CGCCTGAGAT TGTCGAATAT TGTCGCCTAC CTCTTTACCG GATTTGTGCT GGGTCCCTCG
CTGTTTAATC TTCTTAACTC TTATCATGAA ATAGAGCTGG TTGCCGAGTT TGGTATCGTT
TTTTTAATGT TTTCACTCGG ATTGGAGTTT TCATTAAACA AATTGATTAA AATGAGTCGG
GCTGTTTTTG GCATTGGGGC ACTGCAGGTA TGTGCTTCAT TTTTTCTGTT CTATTGGTTA
TGCCAATTAT TTGATCTGAA CTGGCAGCAG GCATTTACCG TTGCTGCGGT CTTAACCATG
TCGTCAACGG CCATTATTGT TAAAGTATTA AGCGATCAGC AGAGGTTACA ATCAAGAATT
GGTCGACTGG CAATCTCCAT TCTTCTTTTT CAAGATCTTG CCGTGGTCCC CTTCTTAATT
ATTATTCCTA TTATTGCAAT GCCGGGGCTT GAAGGCGATA TCGTGACCGC TTTGTTGCTT
GCCTTTGTAA AAGGGGCGTT AGCTGTCGCT GTTATCTTAT CCGTTGGGCG CTGGTTACTG
CCAATGTTTT TTGATGAAAT GGCGAGTATG CGTTTTGATG AGATTTTTAT TCTATCAACG
CTGTTTGTCA CTATCTTAGC CGCCTGGTTT ACGCAATTAT TGGGTCTATC TATGGCATTA
GGGGCTTTTT TGGCGGGTAT GATGCTTAGC GAAAGTCATT ACCGCCATCA ACTTTTGGCC
GATATTAGGC CATTTAAAGA TATTTTGATG GCCATTTTTT TTATCTCAAT TGGTACGCTT
TTACAGTATC AGGTGTTACT CGATGATTTT GGCATATTAA TTTTAATCGT AATAGGTGTG
ATGCTGGCAA AAATCTTAAC CATCACCTTA GCGGCCGTTA TTATGCAAGA GAAATTATCA
ACAGCGCTGG GAACCGGTAT TGCTTTAGCA CAAATGGGTG AGTTTGGTTT TATATTGGTC
GCATTGGCAA GTAAATATAA ATTATTAGAC GCGCAGTTAT CCTCTCTGAT TATTGCAACA
GGAGTAATTA GCATGACGCT GACGCCCTTA TTGGTAAAAT ACAGCAGTTA TATCTCACGC
GAATTATTAC ACCATTCGGC CAACGCTTTT CGTTTTCAAA AAACTTTGCC CGGGCAATTT
ACAAAACATA CCATTATTTG TGGTTATGGA CGTGTCGGGC AAATTGTTTC ACGGTTTTTA
AAAAATGAAT CGCTGCCCTT TATTGTTTTG GACAGAGATC CTATGCGGGT TAAAGAAGCT
AGGGAAGGAG GGGAACTCAT TGAGTTTGGC GATGCGAGCC GCAGGGAAAT ATTGTTACTT
GCCGGTATTG AAAAAGCCAA TTTATTAATT ATCACTTTTG ATGACCTGCG GCGTTCAATG
GCTTTATTAG GGCTGATTAG GGTGCTAAAT CCAAGCCTGA AAGTGCTAGT GCGCACCAAG
GATGATAAGG GTCTGGATCT GTTAAAAGAG GCGGGTGCTA CCGAGGTTAT CCCCGAGGTA
TTAGAGGGCA GTTTGATGTT GGTTGCCCAT GTTTTGTTTT TATCGGGCGT ACCAAGTAGG
CGAATTTTGC AGCGTTTAGA GAGTGAACGC AACATTAAGT ACCAACATCT GCATGGTTTT
TATTATGGAC AAAATAGCCG AAGTGAAAAA AATGCATGGC ATATAGAACA GTTACATGCG
GTAACTTTAA CTGAAGAGGC TGAGGTAGTG GGCAGTTGTG TGCAGGAATT TCACCTTGCC
GGCGTTATAA TAAAATCTCT GCATCGGGAA AATGGAGCAG AGGTGCTCAT TTCAGAAAAA
GTACTTTTTG AACCGGGTGA TCTGGTTTTG CTGCAGGGCG ATAAAGACAG GTTACAACTT
GCTGAGAAAA TTTTGCTTGG AAAGTGTTAC TATGTTCCTG TTTAA
|
|---|
| Protein sequence | MLNDLLLLLF FAIVSVLIFK RLRLSNIVAY LFTGFVLGPS LFNLLNSYHE IELVAEFGIV
FLMFSLGLEF SLNKLIKMSR AVFGIGALQV CASFFLFYWL CQLFDLNWQQ AFTVAAVLTM
SSTAIIVKVL SDQQRLQSRI GRLAISILLF QDLAVVPFLI IIPIIAMPGL EGDIVTALLL
AFVKGALAVA VILSVGRWLL PMFFDEMASM RFDEIFILST LFVTILAAWF TQLLGLSMAL
GAFLAGMMLS ESHYRHQLLA DIRPFKDILM AIFFISIGTL LQYQVLLDDF GILILIVIGV
MLAKILTITL AAVIMQEKLS TALGTGIALA QMGEFGFILV ALASKYKLLD AQLSSLIIAT
GVISMTLTPL LVKYSSYISR ELLHHSANAF RFQKTLPGQF TKHTIICGYG RVGQIVSRFL
KNESLPFIVL DRDPMRVKEA REGGELIEFG DASRREILLL AGIEKANLLI ITFDDLRRSM
ALLGLIRVLN PSLKVLVRTK DDKGLDLLKE AGATEVIPEV LEGSLMLVAH VLFLSGVPSR
RILQRLESER NIKYQHLHGF YYGQNSRSEK NAWHIEQLHA VTLTEEAEVV GSCVQEFHLA
GVIIKSLHRE NGAEVLISEK VLFEPGDLVL LQGDKDRLQL AEKILLGKCY YVPV
|
|---|
| |