Gene Ping_2946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2946 
Symbol 
ID4623654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3631566 
End bp3632138 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content45% 
IMG OID639798064 
Productphage integrase family protein 
Protein accessionYP_944247 
Protein GI119946567 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.329988 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAAG CAAAGACACT TAGCAAATCA GAACTTAAGC AGCTGTTAGA CGTAACAAAT 
TCGTGCAGTC GATATTCGGC ACGTGATAGC ACTATGCTGC TGTTTACGCA CTTGTGTGGT
TTACGTGTTG GCGAAGTAGC TGCGCTGCGT TTTGACGACA TACTTGATGC AAACGGCACA
GTACGAGACG AAATGACACT TGATGCTGCG CGAACAAAGA GCAAACGAGC ACGTAAGATA
TTCTTACCAA AGCAGATGCA GCGTCAGCTA CAAGCATACG TTAACAGCTT AAACAAACAG
CCACAGCACG GTTATTTGTT CTCTACACAG AAGCAAGCAC ACTTTAGTGC AAATACAGCT
ACACAGCATC TACAACGCTT GTATGCACGT GCTGGGATTA GTGGTGCTAC ATCACACAGT
GGTAGACGCA CTTGGCTTAC AGCACTTAGT CAGAGAGGTG TTAGCGTGTT TGTACTAGCG
GATATGGCTG GACACAGAAG CATTCAAACA ACGCAGCGTT ACGTTACAGT TAATGATGAG
ATGAAACGTA ACGCAGCAGA GTTGATTAGC TAA
 
Protein sequence
MAQAKTLSKS ELKQLLDVTN SCSRYSARDS TMLLFTHLCG LRVGEVAALR FDDILDANGT 
VRDEMTLDAA RTKSKRARKI FLPKQMQRQL QAYVNSLNKQ PQHGYLFSTQ KQAHFSANTA
TQHLQRLYAR AGISGATSHS GRRTWLTALS QRGVSVFVLA DMAGHRSIQT TQRYVTVNDE
MKRNAAELIS