Gene Ping_2928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2928 
Symbol 
ID4624451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3613116 
End bp3613865 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content42% 
IMG OID639798046 
Producttranscriptional regulator 
Protein accessionYP_944229 
Protein GI119946549 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0871114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.303622 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTACG CAAAAATCAA ACAACCCAAA CTTGCGGATG TGATTGAAAA TCGTCTTGAA 
AGCATGATTC TAGATGGCTC TTTGGAGCTC GGTGAAAAAT TACCTTCGGA ACGTGAACTG
GCTAAACAGT TTGATGTCTC TCGCCCTTCA CTGCGTGAAG CGATGCAGCG CTTAGAGTCA
AAAGGGTTAC TTAACCGTCG TCAAGGCGGC GGGACCTATG TTAAAGAAGA ATTACGTCAG
CGTTTAACTG ATCCCTTATT TGAACTGTTA AATACCCATC CTGAATCTCA ATATGACTTA
CTTGAGTTTC GTTATGCACT GGAAGGCGTT TCTGCGTATT ACGCAGCCCT GCGTGGTACT
TCTGCTGATT TTGAAAAAAT CAAAAATAGT TTTGCAGCGA TTGAAAAATC CCGTCAAACA
CGCGATCTAG AAAAAGAGGT TCAGCATGTT GCACAGTTTT ATCTGTCTGT AATAGAGGCT
TCTCACAACG TGGTTTTTTT ACATTTAGCG CGTGGAATTC AACCTCTGCT GGAAAAAAAT
ATCGCCGATA ATGTACAGCA ACTTTATGGT TATCCTGAAG TGGCTGATAA AATTCATCAG
CATCGTCTGC AGCTGCTTGA CGCGATTCTA TCCAAGCAAC CCGCAAGTGC ACAACAAGCA
TCAGCACAGC ATTTAAGTTA TATTGAAGAA ACACGTCTTG TGATGTTACG TGAAGAGAGT
TTATTTAAAC GCGCATTAGG GCGTTTTTAA
 
Protein sequence
MTYAKIKQPK LADVIENRLE SMILDGSLEL GEKLPSEREL AKQFDVSRPS LREAMQRLES 
KGLLNRRQGG GTYVKEELRQ RLTDPLFELL NTHPESQYDL LEFRYALEGV SAYYAALRGT
SADFEKIKNS FAAIEKSRQT RDLEKEVQHV AQFYLSVIEA SHNVVFLHLA RGIQPLLEKN
IADNVQQLYG YPEVADKIHQ HRLQLLDAIL SKQPASAQQA SAQHLSYIEE TRLVMLREES
LFKRALGRF