| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2874 |
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| Symbol | petA |
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| ID | 4625656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 3554639 |
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| End bp | 3555229 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639797995 |
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| Product | ubiquinol-cytochrome c reductase iron-sulfur subunit PetA |
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| Protein accession | YP_944178 |
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| Protein GI | 119946498 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0723] Rieske Fe-S protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00115188 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAATG CGCCTGTTAA TTCTGGTCGC CGCAAGTTTT TGACATTAAC AACAGCTGTT
GTTGGTGGAG TCGGAGCCGT TGCAGTAGCG GTACCCTTCG TGAAATCTTG GAGCCCAAGT
GAAAAAGCAA AAGCAGCTGG AGCACCAGTT GCTGTTGATA TTAGTAAAAT CGAACCGGGA
CAATTAATTC GCGTTGCATG GCGTGGTAAA CCTGTTTGGG TCGTATCCCG CACACAAAAA
GTGATTGATG AATTACCGAC TCATGACGGT CAGTTACGTG ATCCTGATTC ACAAGAACCG
CAACAACCCG ATTACATAAC AAACTTAGGC CGTGCACTAA AACCTGAGAT TTTTATCGCT
GTGGGTATAT GCACCCATTT AGGTTGTTCA CCTAGTTATC TACCCGATTC TTTTTCTGAA
CAAGTTCAGG GTATTGAGTC TGGTTTCTTT TGTCCATGCC ACGGTTCGAA ATTTGATATG
GCAGGTCGTG TCTTCCAAGG TGTCCCTGCG CCATTAAATT TAGTTATCCC TCCTCATTAT
TACACGAGTG ATACAACGAT TCTTATCGGC TCAGATAAAG GAGACGCCTA A
|
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| Protein sequence | MSNAPVNSGR RKFLTLTTAV VGGVGAVAVA VPFVKSWSPS EKAKAAGAPV AVDISKIEPG
QLIRVAWRGK PVWVVSRTQK VIDELPTHDG QLRDPDSQEP QQPDYITNLG RALKPEIFIA
VGICTHLGCS PSYLPDSFSE QVQGIESGFF CPCHGSKFDM AGRVFQGVPA PLNLVIPPHY
YTSDTTILIG SDKGDA
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