Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2838 |
Symbol | |
ID | 4626282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 3489707 |
End bp | 3490450 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639797960 |
Product | nuclease |
Protein accession | YP_944143 |
Protein GI | 119946463 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.426487 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGAATAG TTAGCTTGCT ATTGTGTATT CTTTTTTCAA CATCATTACT GGCTAATTGT CCGAAATTGT CATGGCATAA GACCGTCACG TTAAAATACA TTAATGACGG TGATACTGTG ACTCTGGATA ATGGTCAATT AGTTCGCTTT ATCGGTATTA ATACGCCCGA GATTGATTAT TCGAATAAGC ATCAATCAGA GCCTTTTGCA CTGGCGGCAA AGCGTCTATT AGAAGAACAA CTCAAAAGGG GAGACAAGTT ACATTTAATT TTTGATCATA CCAGATATGA TAGATATGGC CGATTATTGG CCTATGTATT TACCGACGCT GGGACGAATT TAGGCTTGCT ACAGTTAAAA TCCGGTCTTG CCAGACATTG GGTAATAGGA AAAAACGATT TGTTCTGGCA ATGCTTTCAG GATGCAGAGC GGCAAGCGCG CCTAACAAAA GAAGGAGTAT GGGCAGACTT TAATCCTTTA AAGGCGCAAA GTTTATCGTT TAAAGATAAA GGTTATCAAT ACATTCAAGG GAAAGTTACC GCGCTGCGGC AAACTAAAAA AGGTTTGCAG TTGACTTTAG ATGGTAAATT GAACGTGAAT ATTAATAGAA AAACATTAAC CTATTTTAAA ACACTGGGCA CACAATTTAG ACTACATAAT AGTATTTTAT TAACAGGTAA TTTAAAATGG TCTCAGGGTC AGTTACAATT AAAGATTTAT CATCCAGCGC AAATATTGCC CTGA
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Protein sequence | MRIVSLLLCI LFSTSLLANC PKLSWHKTVT LKYINDGDTV TLDNGQLVRF IGINTPEIDY SNKHQSEPFA LAAKRLLEEQ LKRGDKLHLI FDHTRYDRYG RLLAYVFTDA GTNLGLLQLK SGLARHWVIG KNDLFWQCFQ DAERQARLTK EGVWADFNPL KAQSLSFKDK GYQYIQGKVT ALRQTKKGLQ LTLDGKLNVN INRKTLTYFK TLGTQFRLHN SILLTGNLKW SQGQLQLKIY HPAQILP
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