Gene Ping_2838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2838 
Symbol 
ID4626282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3489707 
End bp3490450 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content37% 
IMG OID639797960 
Productnuclease 
Protein accessionYP_944143 
Protein GI119946463 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.426487 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGAATAG TTAGCTTGCT ATTGTGTATT CTTTTTTCAA CATCATTACT GGCTAATTGT 
CCGAAATTGT CATGGCATAA GACCGTCACG TTAAAATACA TTAATGACGG TGATACTGTG
ACTCTGGATA ATGGTCAATT AGTTCGCTTT ATCGGTATTA ATACGCCCGA GATTGATTAT
TCGAATAAGC ATCAATCAGA GCCTTTTGCA CTGGCGGCAA AGCGTCTATT AGAAGAACAA
CTCAAAAGGG GAGACAAGTT ACATTTAATT TTTGATCATA CCAGATATGA TAGATATGGC
CGATTATTGG CCTATGTATT TACCGACGCT GGGACGAATT TAGGCTTGCT ACAGTTAAAA
TCCGGTCTTG CCAGACATTG GGTAATAGGA AAAAACGATT TGTTCTGGCA ATGCTTTCAG
GATGCAGAGC GGCAAGCGCG CCTAACAAAA GAAGGAGTAT GGGCAGACTT TAATCCTTTA
AAGGCGCAAA GTTTATCGTT TAAAGATAAA GGTTATCAAT ACATTCAAGG GAAAGTTACC
GCGCTGCGGC AAACTAAAAA AGGTTTGCAG TTGACTTTAG ATGGTAAATT GAACGTGAAT
ATTAATAGAA AAACATTAAC CTATTTTAAA ACACTGGGCA CACAATTTAG ACTACATAAT
AGTATTTTAT TAACAGGTAA TTTAAAATGG TCTCAGGGTC AGTTACAATT AAAGATTTAT
CATCCAGCGC AAATATTGCC CTGA
 
Protein sequence
MRIVSLLLCI LFSTSLLANC PKLSWHKTVT LKYINDGDTV TLDNGQLVRF IGINTPEIDY 
SNKHQSEPFA LAAKRLLEEQ LKRGDKLHLI FDHTRYDRYG RLLAYVFTDA GTNLGLLQLK
SGLARHWVIG KNDLFWQCFQ DAERQARLTK EGVWADFNPL KAQSLSFKDK GYQYIQGKVT
ALRQTKKGLQ LTLDGKLNVN INRKTLTYFK TLGTQFRLHN SILLTGNLKW SQGQLQLKIY
HPAQILP